Atp Synthase Subunit Beta, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-118   GLU-119  15.9 16.4 26.0 -7.0 143.4 154.5 -80.2
 GLU-119   ALA-120  17.1 16.8 -27.9 25.1 36.8 47.2 52.7
 ALA-120   PRO-121  16.3 15.4 16.9 16.3 105.1 105.3 -46.2
 PRO-121   GLU-122  16.8 16.7 -9.7 -15.6 10.8 44.5 117.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-129   GLN-130  10.7 10.7 -30.2 59.1 149.4 136.8 105.4
 GLN-130   GLU-131  9.3 8.7 -16.4 -1.6 56.4 60.4 76.1
 GLU-131   ILE-132  10.0 9.4 -1.1 2.5 112.5 125.9 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-169   ILE-170  11.2 11.2 -1.0 0.0 61.0 71.8 -4.7
 ILE-170   ASN-171  9.9 10.3 -1.6 -1.7 78.5 87.8 35.4
 ASN-171   ASN-172  13.5 13.9 -1.0 -0.9 141.7 153.5 11.4
 ASN-172   VAL-173  14.4 14.7 -3.2 -1.5 105.0 114.7 18.7
 VAL-173   ALA-174  12.1 13.0 0.2 -0.3 132.9 132.5 2.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-175   ALA-176  14.7 15.5 -3.3 8.4 46.1 42.1 -46.3
 ALA-176   HIS-177  16.0 17.3 -68.0 61.0 73.1 68.2 122.2
 HIS-177   GLY-178  14.8 16.1 -45.4 6.6 141.6 153.1 -144.5
 GLY-178   GLY-179  15.7 16.1 99.3 -59.4 86.3 94.6 -52.8
 GLY-179   TYR-180  12.1 12.7 75.3 -57.3 19.8 18.6 94.0
 TYR-180   SER-181  10.5 10.3 -7.6 -0.8 84.7 78.6 -0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-297   THR-298  9.4 8.8 48.3 -19.3 81.3 87.7 -1.1
 THR-298   THR-299  9.7 10.7 -2.0 18.0 61.8 86.0 -52.0
 THR-299   LYS-300  13.3 14.2 -19.9 17.8 73.3 66.7 -0.1
 LYS-300   LYS-301  15.9 16.9 -13.5 33.9 139.5 137.9 52.9
 LYS-301   GLY-302  17.0 17.1 -47.4 19.4 123.5 94.5 -20.2
 GLY-302   SER-303  13.7 13.8 36.0 -2.2 113.4 108.5 -68.8
 SER-303   ILE-304  10.1 10.1 -0.6 -1.5 144.2 142.9 9.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  5.9 5.2 2.4 -12.7 158.3 153.4 46.3
 ASP-330   ALA-331  3.2 2.5 -0.8 -1.2 84.7 87.9 50.5
 ALA-331   THR-332  3.3 3.8 3.3 2.5 48.2 46.4 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees