Arginyl-Trna Synthetase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-188
LEU-189
4.5
4.5
-0.6
-0.4
75.2
75.0
4.3
LEU-189
GLY-190
1.8
1.9
19.5
-13.5
50.6
44.7
66.7
GLY-190
ASP-191
3.4
3.7
-7.7
13.7
57.6
65.4
-36.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-204
ARG-205
21.2
20.6
14.9
-17.2
75.0
70.2
5.5
ARG-205
TYR-206
23.3
22.5
-12.2
12.3
154.1
155.9
2.3
TYR-206
GLY-207
22.0
21.0
20.2
0.3
49.2
58.7
168.7
GLY-207
ASN-208
19.2
18.3
-20.3
22.6
143.1
159.7
50.6
ASN-208
GLU-209
19.4
18.0
18.0
-22.7
63.7
71.2
-46.8
GLU-209
GLU-210
17.4
16.6
-28.1
24.9
153.2
140.3
-65.7
GLU-210
ALA-211
16.8
15.5
13.0
-12.0
88.7
98.5
-15.9
ALA-211
LEU-212
16.2
14.4
-10.8
-3.4
61.1
58.6
43.7
LEU-212
VAL-213
13.5
12.0
28.1
4.5
51.5
55.9
243.3
VAL-213
LYS-214
11.6
10.4
-16.9
2.1
127.0
104.9
-116.3
LYS-214
ASP-215
12.1
8.9
-18.3
16.9
66.9
46.0
-38.0
ASP-215
PRO-216
10.8
7.8
27.0
-15.6
166.1
155.3
-114.5
PRO-216
ILE-217
10.1
7.9
-12.4
11.8
54.7
55.0
-23.8
ILE-217
HIS-218
10.4
8.1
19.5
-14.1
83.8
74.3
0.4
HIS-218
HIS-219
13.9
11.1
-17.6
7.7
64.8
73.6
48.5
HIS-219
LEU-220
15.2
13.0
4.8
-2.8
174.8
170.9
-27.4
LEU-220
PHE-221
13.6
12.0
10.9
-7.4
118.5
118.6
-8.1
PHE-221
ASP-222
15.0
13.3
-5.4
3.4
88.9
94.2
14.1
ASP-222
VAL-223
18.4
16.7
-7.6
5.4
41.6
49.2
25.1
VAL-223
TYR-224
17.9
16.9
11.4
-15.0
151.3
159.2
19.9
TYR-224
VAL-225
16.7
16.0
6.7
-7.7
100.6
95.4
-58.0
VAL-225
ARG-226
19.9
18.7
5.8
-0.2
107.5
92.8
-37.6
ARG-226
ILE-227
22.4
21.2
14.1
-18.8
154.5
147.1
58.1
ILE-227
ASN-228
21.1
20.6
2.1
7.2
139.6
143.0
-104.5
ASN-228
LYS-229
20.9
20.6
-3.5
-4.3
83.5
87.5
31.3
LYS-229
ASP-230
24.6
24.1
-2.7
0.6
53.9
69.5
11.4
ASP-230
ILE-231
25.4
25.3
23.7
-45.2
166.8
175.7
262.3
ILE-231
GLU-232
23.7
24.4
34.0
-33.9
108.0
109.8
-51.1
GLU-232
GLU-233
25.7
25.6
38.9
-41.2
91.5
77.2
-71.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-268
PHE-269
10.3
10.1
-6.2
2.6
93.1
95.4
20.8
PHE-269
ARG-270
8.1
8.1
11.0
-18.5
105.3
100.8
9.2
ARG-270
GLU-271
5.6
5.2
5.0
-3.0
46.5
43.8
17.5
GLU-271
PHE-272
5.8
5.9
14.6
-14.5
46.7
35.9
24.2
PHE-272
SER-273
4.5
4.9
23.0
-20.0
107.6
98.4
12.0
SER-273
ILE-274
2.8
2.5
4.2
-3.3
92.4
86.6
25.7
ILE-274
GLU-275
1.2
1.7
-8.3
10.4
154.7
158.9
27.6
GLU-275
LYS-276
1.8
2.6
3.3
-10.0
71.9
67.2
-11.3
LYS-276
TYR-277
2.3
1.5
-3.3
12.7
62.2
62.4
-69.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-292
GLY-293
5.5
5.5
-1.9
10.2
94.7
95.5
8.2
GLY-293
GLU-294
2.1
2.2
7.9
-22.1
32.5
22.4
-148.0
GLU-294
SER-295
1.7
1.6
18.0
-17.8
88.7
85.4
32.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-309
LYS-310
3.7
3.5
6.7
-6.4
162.9
162.2
-0.6
LYS-310
GLU-311
4.4
4.8
-4.6
0.5
61.5
54.3
25.8
GLU-311
LYS-312
7.7
7.3
-6.1
7.7
66.8
71.7
10.1
LYS-312
GLY-313
6.8
5.8
-9.0
-0.7
55.3
63.6
55.7
GLY-313
LEU-314
3.5
2.2
-7.0
19.0
114.2
118.0
96.4
LEU-314
THR-315
2.8
2.1
-22.3
17.7
99.6
100.6
-6.5
THR-315
HIS-316
1.4
2.3
-2.5
-14.5
34.1
37.3
151.4
HIS-316
GLU-317
4.4
5.4
-8.6
4.7
112.6
117.7
-41.8
GLU-317
ASP-318
7.8
9.0
9.3
-29.5
94.4
102.0
19.8
ASP-318
LYS-319
10.8
12.0
33.4
20.4
64.0
41.7
406.8
LYS-319
GLY-320
14.1
15.4
-37.3
8.6
139.4
122.5
-249.9
GLY-320
ALA-321
12.8
14.6
11.0
-28.3
43.9
48.8
-172.1
ALA-321
VAL-322
10.2
11.4
16.5
-15.3
111.3
121.4
1.2
VAL-322
LEU-323
6.4
7.7
12.2
-13.5
75.7
65.7
26.6
LEU-323
ILE-324
5.7
6.4
1.0
24.2
110.3
125.0
-83.5
ILE-324
ASP-325
4.8
5.1
10.4
5.7
99.6
106.0
-35.7
ASP-325
LEU-326
7.9
7.8
0.1
-9.6
90.0
87.6
-22.3
LEU-326
THR-327
9.5
9.4
-3.0
-6.0
57.4
58.7
32.6
THR-327
LYS-328
12.3
12.3
18.3
-23.2
124.9
132.6
56.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees