Shikimate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-112
SER-113
7.2
7.1
5.2
-5.2
171.6
171.3
5.5
SER-113
LEU-114
5.6
5.4
7.9
-2.1
121.1
121.6
-46.1
LEU-114
LYS-115
7.3
7.5
15.7
4.2
92.4
97.8
-26.4
LYS-115
SER-116
10.6
10.6
-30.8
14.9
49.7
26.7
164.3
SER-116
LEU-117
10.7
10.4
28.3
-41.0
151.9
144.6
92.4
LEU-117
ILE-118
10.0
9.8
-3.2
2.7
92.9
95.6
2.5
ILE-118
PRO-119
12.6
12.1
-10.7
22.6
146.9
143.7
131.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-137
VAL-138
6.9
7.1
-0.4
-3.5
129.2
131.7
5.3
VAL-138
ILE-139
7.5
7.7
10.0
-6.6
104.3
100.5
29.6
ILE-139
TYR-140
11.1
11.3
16.5
-16.9
140.1
138.1
12.4
TYR-140
ALA-141
10.0
10.1
-0.1
4.2
105.9
108.3
14.7
ALA-141
LEU-142
8.6
8.6
0.1
-1.7
61.1
61.4
-43.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-234
GLY-235
1.1
1.5
-3.2
-2.9
14.5
13.4
95.2
GLY-235
LEU-236
2.3
2.6
8.4
-7.2
104.7
107.2
4.6
LEU-236
PRO-237
4.9
5.0
2.4
0.5
131.3
131.8
-63.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees