Putative Repressor Simreg2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-168   ARG-169  1.4 2.1 9.3 -0.5 60.2 62.2 37.7
 ARG-169   ASN-170  2.3 2.6 -0.7 -2.1 115.1 107.4 -19.1
 ASN-170   GLU-171  2.0 1.6 -5.6 4.7 41.7 36.5 -19.8
 GLU-171   VAL-172  3.5 2.8 1.6 -16.0 104.8 104.6 53.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-206   MET-207  17.6 17.6 -21.7 19.3 147.6 152.1 9.5
 MET-207   PHE-208  15.7 15.6 -8.2 5.4 136.6 133.2 -23.9
 PHE-208   ALA-209  14.4 14.2 -1.9 -2.3 110.4 119.2 -15.3
 ALA-209   ARG-210  18.2 17.9 -0.4 3.1 131.7 129.1 0.5
 ARG-210   VAL-211  19.2 18.8 14.4 -47.4 27.4 27.6 -143.8
 VAL-211   LEU-212  16.4 16.0 54.5 -7.8 57.7 59.5 137.1
 LEU-212   ALA-213  17.6 16.4 -15.0 28.6 111.1 160.8 53.8
 ALA-213   GLU-214  21.2 18.6 -23.5 50.0 133.9 134.6 109.9
 GLU-214   THR-215  20.8 16.3 -18.9 -4.7 136.2 92.8 -13.9
 THR-215   VAL-216  17.6 13.2 178.2 30.8 25.0 58.2 -575.7
 VAL-216   ALA-217  17.9 15.3 -5.4 -101.4 114.8 171.1 1342.7
 ALA-217   PRO-218  14.3 16.1 143.7 10.1 78.1 80.3 -1382.2
 PRO-218   HIS-219  13.2 14.9 150.3 37.1 56.3 45.9 832.4
 HIS-219   MET-220  16.4 17.6 -61.7 -6.5 158.4 152.9 -363.5
 MET-220   GLY-221  15.0 15.4 -6.2 -21.9 110.7 92.0 80.4
 GLY-221   PRO-222  12.6 12.2 5.3 11.1 101.8 88.8 14.4
 PRO-222   ASP-223  8.9 8.5 -5.7 6.3 119.4 121.6 3.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees