Putative Enzyme Ydif
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-275
ASP-276
20.3
20.2
-2.7
20.4
48.2
52.5
-349.5
PRO-284
LEU-285
24.4
24.1
-17.8
-5.1
133.0
135.8
-505.4
LEU-285
ASN-286
23.7
23.7
5.5
-0.3
151.1
149.9
19.9
LEU-285
ASN-286
23.7
23.7
5.5
-0.3
151.1
149.9
19.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-285
ASN-286
23.7
23.7
5.5
-0.3
151.1
149.9
19.9
LEU-285
ASN-286
23.7
23.7
5.5
-0.3
151.1
149.9
19.9
ASN-286
GLN-287
24.4
24.4
3.6
-9.9
132.6
128.4
238.9
GLN-287
ARG-288
22.9
22.7
3.5
3.8
86.4
89.1
-128.2
ARG-288
LYS-289
20.2
20.2
-0.4
2.7
136.7
140.7
-21.1
LYS-289
LEU-290
19.1
19.1
-0.8
0.0
81.0
82.2
-65.1
LEU-290
VAL-291
19.4
19.3
-1.8
1.3
55.8
57.1
60.8
VAL-291
ALA-292
16.8
16.8
5.0
-3.0
61.8
61.4
-40.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-302
ALA-303
3.4
3.4
-6.4
-0.4
15.1
13.2
205.0
ALA-303
VAL-304
1.9
2.0
2.1
0.2
99.0
99.0
60.3
VAL-304
GLY-305
4.1
4.1
-2.0
15.0
43.2
44.4
-332.0
GLY-305
ASN-306
4.3
4.3
-3.4
3.3
72.0
68.5
211.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-309
GLY-310
15.7
15.6
-2.2
-32.3
68.9
81.4
93.1
GLY-310
ILE-311
16.9
17.3
12.0
3.2
41.8
46.1
309.2
ILE-311
ALA-312
17.5
17.1
8.4
23.7
36.0
50.9
713.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-318
ALA-319
13.7
13.7
-2.7
1.4
58.6
55.0
-25.9
ALA-319
ARG-320
10.1
10.1
-4.4
2.4
19.4
21.6
61.7
ARG-320
GLU-321
11.4
11.6
1.1
1.0
123.8
122.0
-6.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-323
CYS-324
8.8
9.0
9.3
-6.9
112.2
111.4
91.1
CYS-324
ALA-325
6.0
6.1
-8.6
4.5
55.3
54.4
111.3
ALA-325
ASP-326
7.0
7.1
4.1
-4.7
84.8
84.2
49.3
ASP-326
ASP-327
5.2
5.4
1.8
-7.6
106.7
103.5
-28.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-330
THR-331
7.8
7.8
0.8
3.1
73.6
73.6
-0.3
THR-331
VAL-332
10.2
10.2
-1.8
8.9
136.3
133.2
132.0
VAL-332
GLU-333
12.8
13.0
-8.4
12.4
135.7
139.7
58.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-334
GLY-335
17.0
17.0
0.0
6.0
133.7
133.3
79.8
GLY-335
PRO-336
16.9
16.9
-1.7
8.0
161.9
163.6
74.1
PRO-336
ILE-337
16.3
16.3
4.2
-9.9
78.0
79.6
-34.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-371
ASP-372
4.4
4.2
-4.3
-1.9
86.8
88.2
23.1
ASP-372
VAL-373
2.4
2.3
0.5
10.7
71.0
75.0
175.4
VAL-373
CYS-374
1.4
1.5
-12.2
11.8
106.6
111.3
-86.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-387
GLY-388
10.0
10.0
-1.2
-0.8
60.8
62.0
-8.1
GLY-388
VAL-389
12.1
12.1
-4.0
9.6
131.6
132.1
126.2
VAL-389
HIS-390
13.7
13.9
5.4
6.1
112.3
116.9
-44.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-407
THR-408
2.9
2.9
-7.7
9.1
63.5
63.2
-43.0
THR-408
SER-409
3.7
3.8
-8.9
6.2
13.5
16.8
76.4
SER-409
LYS-410
2.2
2.2
5.3
-3.9
96.3
93.8
31.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-421
SER-422
28.3
27.8
4.7
-14.3
56.0
55.4
-139.1
SER-422
LEU-423
30.7
30.2
20.3
-17.4
56.4
66.6
-8.2
LEU-423
LYS-424
28.8
28.5
-0.5
5.8
160.4
165.8
116.4
LYS-424
THR-425
30.4
30.1
3.0
9.0
62.2
66.8
73.8
THR-425
GLU-426
29.0
29.0
15.3
-1.5
11.9
13.8
530.8
GLU-426
ILE-427
29.2
29.6
-12.4
-17.9
115.3
116.3
-348.2
ILE-427
ALA-428
27.8
27.8
5.7
-35.7
41.4
24.4
-726.6
ALA-428
ASP-429
30.7
29.6
16.4
4.9
77.0
87.0
523.3
ASP-429
GLY-430
31.3
30.8
-2.8
-6.4
75.9
66.3
131.7
GLY-430
LYS-431
28.0
27.5
11.8
-8.5
165.0
167.5
-68.9
LYS-431
LEU-432
28.8
28.3
6.1
-9.7
123.8
121.8
185.9
LEU-432
ASN-433
27.9
27.7
5.5
-2.7
115.6
115.7
-54.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-434
VAL-435
30.9
30.8
6.5
-18.2
83.3
82.6
-190.2
VAL-435
GLN-436
33.7
33.7
8.5
2.8
21.3
28.1
288.3
GLN-436
GLU-437
33.2
33.1
-18.9
21.5
119.1
117.5
12.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-448
GLU-449
13.5
13.4
-7.9
6.6
96.4
96.6
92.9
GLU-449
ILE-450
11.2
11.1
-3.3
6.2
151.1
151.9
65.3
ILE-450
THR-451
8.4
8.4
-0.8
1.0
126.8
127.5
-60.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-455
ILE-456
6.4
6.3
-12.8
13.4
69.9
65.7
-77.3
ILE-456
ALA-457
3.8
3.7
-6.3
-2.8
9.7
12.5
219.3
ALA-457
LEU-458
4.1
4.1
6.3
-7.0
100.0
100.0
-55.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees