Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-86   PRO-87  3.0 3.2 25.0 5.4 92.7 105.2 -26.4
 PRO-87   GLU-88  4.7 4.9 -62.1 13.1 34.5 31.9 174.6
 GLU-88   ILE-89  7.4 6.9 7.6 -7.7 100.6 90.7 -78.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-186   PRO-187  8.7 8.9 -12.2 -3.2 53.7 64.4 21.2
 PRO-187   ALA-188  7.1 7.1 -14.5 13.7 103.1 101.7 -10.0
 ALA-188   VAL-189  4.7 4.4 -0.8 16.0 70.8 51.1 -11.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees