Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-146   VAL-147  6.2 6.8 -0.5 -6.5 129.7 132.5 3.8
 VAL-147   GLN-148  9.2 9.2 9.6 0.7 101.1 109.7 -2.5
 GLN-148   VAL-149  9.9 9.8 0.8 -2.9 75.0 86.2 -9.8
 VAL-149   ILE-150  6.6 6.4 3.7 7.0 8.1 18.1 48.5
 ILE-150   CYS-151  6.4 6.4 -3.6 5.7 111.8 101.0 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-211   ALA-212  12.9 13.8 11.8 -8.6 111.2 99.7 16.8
 ALA-212   VAL-213  15.7 16.2 7.5 14.1 120.2 119.2 -32.0
 VAL-213   SER-214  13.8 14.1 174.5 -101.1 158.7 160.1 -469.6
 SER-214   ASP-215  12.0 16.2 147.3 -9.9 129.1 88.3 1137.7
 ASP-215   MET-216  15.5 17.2 -148.1 12.9 68.1 55.5 -459.6
 MET-216   ASP-217  17.0 20.7 3.3 77.1 130.0 166.2 -424.9
 ASP-217   GLY-218  14.5 19.3 -73.4 157.2 81.0 90.1 -57.0
 GLY-218   ASP-219  11.4 18.2 7.9 29.9 109.7 83.8 -7.2
 ASP-219   ARG-220  10.2 14.5 178.4 -91.6 34.5 36.0 547.4
 ARG-220   LEU-221  10.4 12.5 -149.8 71.6 112.1 80.0 -67.2
 LEU-221   SER-222  8.1 9.3 18.8 14.4 123.3 121.4 -63.9
 SER-222   GLN-223  7.5 9.4 0.7 4.2 55.8 53.9 27.4
 GLN-223   GLU-224  9.1 10.6 -0.4 1.4 104.6 97.2 9.3
 GLU-224   GLU-225  6.7 7.7 -2.5 -0.6 132.1 129.4 -33.3
 GLU-225   LEU-226  3.9 5.3 1.5 -3.3 156.1 162.9 -13.7
 GLU-225   LEU-226  3.9 5.3 1.5 -3.3 156.1 162.9 -13.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-225   LEU-226  3.9 5.3 1.5 -3.3 156.1 162.9 -13.7
 GLU-225   LEU-226  3.9 5.3 1.5 -3.3 156.1 162.9 -13.7
 LEU-226   VAL-227  6.6 7.5 -0.5 -3.4 64.4 65.0 25.2
 VAL-227   ALA-228  7.7 8.0 0.4 5.0 108.3 95.8 -3.8
 ALA-228   MET-229  4.9 4.9 -3.5 -2.5 32.9 35.6 18.4
 MET-229   ALA-230  3.1 3.1 3.5 -4.7 143.0 148.2 -5.8
 ALA-230   MET-231  6.2 5.8 -1.3 0.8 76.0 80.1 -13.1
 MET-231   LEU-232  7.1 6.6 5.1 -0.1 120.2 106.1 -0.8
 LEU-232   LEU-233  4.6 3.8 3.4 3.5 163.4 168.4 -50.5
 LEU-233   LEU-234  3.4 2.7 -4.9 4.4 54.8 55.0 -0.6
 LEU-234   ILE-235  7.0 6.3 -2.6 -6.2 74.4 89.8 27.8
 ILE-235   ALA-236  8.3 7.7 2.1 -12.9 132.3 116.1 47.7
 ALA-236   GLY-237  5.9 5.9 14.2 -35.3 154.8 173.0 97.4
 GLY-237   HIS-238  5.8 4.8 7.5 14.5 114.2 128.9 -44.6
 HIS-238   GLU-239  9.5 8.0 -49.9 64.6 102.3 111.2 46.5
 HIS-238   GLU-239  9.5 8.0 -49.9 64.6 102.3 111.2 46.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-238   GLU-239  9.5 8.0 -49.9 64.6 102.3 111.2 46.5
 HIS-238   GLU-239  9.5 8.0 -49.9 64.6 102.3 111.2 46.5
 GLU-239   THR-240  10.7 11.0 -49.4 64.8 109.0 115.1 64.4
 THR-240   THR-241  9.2 9.7 19.7 -10.3 7.8 17.0 21.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees