Abc Transporter, Periplasmic Substrate-Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-116
THR-117
6.7
7.0
-14.3
40.8
121.2
121.6
53.1
THR-117
ASP-118
3.0
3.4
7.3
-1.8
113.5
108.0
24.1
ASP-118
ALA-119
1.8
2.3
-7.4
9.8
119.8
98.3
9.7
ALA-119
GLY-120
4.0
4.0
-32.3
6.8
70.1
71.6
19.2
GLY-120
ILE-121
7.8
7.8
-3.6
0.7
37.7
35.2
8.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-283
LEU-284
6.5
6.7
3.2
10.5
72.1
74.3
34.5
LEU-284
GLY-285
2.9
3.1
-10.5
-2.1
72.9
67.6
15.9
GLY-285
GLY-286
1.9
2.7
-4.3
25.3
105.5
103.6
27.9
GLY-286
TRP-287
3.9
4.3
-16.2
2.1
51.1
49.9
27.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-352
ALA-353
10.8
9.6
-12.8
12.1
129.4
121.9
-2.6
ALA-353
VAL-354
7.6
6.9
3.6
37.1
17.4
12.3
100.5
VAL-354
SER-355
8.0
7.9
-17.6
21.6
117.9
124.3
-3.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees