Scaffolding Protein Gpd
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-94
CYS-95
3.0
4.2
15.9
-23.4
23.5
18.0
-13.1
CYS-95
LEU-96
2.0
2.6
8.7
-4.8
60.0
55.0
10.3
LEU-96
ILE-97
1.7
1.8
9.2
7.0
68.6
74.1
16.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-114
VAL-115
0.7
3.5
11.1
-8.4
59.8
44.0
-1.6
VAL-115
LYS-116
2.0
4.7
10.8
-30.2
61.4
53.4
-16.5
LYS-116
ALA-117
3.8
3.4
49.8
33.3
7.6
17.0
90.1
ALA-117
ALA-118
3.4
3.4
-5.2
-10.3
108.8
106.9
-2.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees