D-Alanine:d-Lactate Ligase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-135
LYS-136
7.1
7.1
3.1
1.7
18.0
22.4
41.0
LYS-136
ALA-137
8.7
9.1
-5.1
2.9
101.1
104.3
18.7
ALA-137
LEU-138
10.6
10.9
-12.4
16.1
85.7
90.9
-1.0
LEU-138
THR-139
8.5
8.6
-1.6
-3.2
36.2
34.7
64.7
LEU-138
THR-139
8.5
8.6
-1.6
-3.2
36.2
34.7
64.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-138
THR-139
8.5
8.6
-1.6
-3.2
36.2
34.7
64.7
LEU-138
THR-139
8.5
8.6
-1.6
-3.2
36.2
34.7
64.7
THR-139
LYS-140
6.1
6.3
7.4
-2.1
141.5
140.1
-71.5
LYS-140
GLU-141
8.8
9.2
-14.5
11.6
96.7
95.3
33.4
GLU-141
LEU-142
11.0
11.3
-3.2
2.4
76.1
77.0
23.5
LEU-142
LEU-143
9.1
9.4
-10.1
6.6
11.8
12.2
36.2
LEU-143
THR-144
8.1
8.2
6.5
-7.4
119.1
123.1
6.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-147
ILE-148
11.6
11.7
-14.5
4.8
108.7
113.9
-58.5
ILE-148
ARG-149
7.9
8.0
-5.1
6.6
99.4
99.1
10.7
ARG-149
ASN-150
8.3
8.3
-4.7
-1.7
58.9
63.6
68.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-218
VAL-219
17.1
16.8
6.3
7.4
152.0
155.7
-144.8
VAL-219
ASN-220
14.6
14.4
8.4
10.2
121.0
125.1
-86.7
ASN-220
GLY-221
16.4
16.3
-63.3
13.2
61.4
71.5
284.1
GLY-221
ALA-222
13.5
13.8
7.6
-45.3
81.0
54.3
-74.0
ALA-222
ARG-223
15.0
14.5
80.8
7.6
58.6
100.5
251.5
ARG-223
GLU-224
12.9
11.6
-55.3
29.8
129.1
142.0
-180.0
GLU-224
LEU-225
10.7
10.6
-17.9
-7.4
84.9
77.6
32.1
LEU-225
GLU-226
8.2
7.8
-9.7
2.2
154.5
156.8
-70.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-238
GLU-239
11.8
11.5
-5.6
-0.8
148.5
150.9
-58.1
GLU-239
ILE-240
11.3
11.0
13.9
-12.4
107.1
104.5
19.5
ILE-240
GLY-241
8.8
8.7
1.2
4.2
79.2
79.2
27.8
GLY-241
ALA-242
11.3
11.1
-36.1
27.8
96.0
101.0
1.0
ALA-242
HIS-243
11.9
11.0
-1.3
69.1
79.3
89.7
-136.4
HIS-243
THR-244
14.8
13.9
-28.1
15.6
100.0
154.2
-131.0
HIS-268
PHE-269
19.5
19.2
-52.3
33.0
76.1
104.3
-63.8
PHE-269
GLN-270
17.2
16.1
-8.4
26.1
140.0
140.7
127.7
GLN-270
ILE-271
15.0
14.9
-1.9
3.9
67.5
77.1
32.0
ILE-271
PRO-272
14.5
14.1
15.9
-0.7
42.3
41.0
122.8
PRO-272
ALA-273
12.4
12.3
-12.4
13.6
112.2
111.9
14.8
ALA-273
GLN-274
10.2
9.7
-10.1
-14.2
157.3
159.4
-254.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-275
SER-276
5.7
5.3
-0.5
10.9
132.4
126.7
89.7
SER-276
PRO-277
3.0
2.8
-8.1
10.7
60.8
58.9
-2.7
PRO-277
GLU-278
4.5
4.9
-5.0
-4.9
52.6
51.8
40.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-283
LYS-284
1.6
1.6
0.3
-7.2
57.0
51.3
-70.8
LYS-284
GLN-285
5.3
5.2
-2.0
8.6
119.2
120.7
42.7
GLN-285
MET-286
6.4
6.4
-0.6
-2.0
137.6
137.7
-33.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-311
PRO-312
7.0
7.0
-14.8
4.1
27.1
29.8
76.2
PRO-312
TYR-313
5.2
5.0
-8.1
3.3
35.9
33.7
8.4
TYR-313
LEU-314
6.7
6.6
-11.4
2.9
42.6
40.1
72.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-315
GLU-316
7.0
6.6
-63.4
77.1
166.5
154.5
124.2
GLU-316
PRO-317
5.6
6.0
-12.2
6.8
97.9
91.5
-5.1
PRO-317
ASN-318
3.4
3.5
-6.6
18.6
130.4
130.4
79.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees