D-Maltodextrin-Binding Protein 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-107   ILE-108  8.8 8.9 6.9 -5.9 150.7 152.2 -8.2
 ILE-108   ALA-109  8.9 9.1 11.3 -27.2 134.9 132.8 20.8
 ALA-109   VAL-110  5.6 5.8 -4.9 18.2 117.1 116.0 15.6
 VAL-110   GLU-111  2.0 2.1 -17.5 26.8 66.1 62.4 6.6
 GLU-111   ALA-112  2.2 3.0 -0.1 13.9 110.9 99.0 19.8
 ALA-112   LEU-113  5.0 4.9 -7.5 -7.3 50.4 56.9 22.5
 LEU-113   SER-114  8.5 8.5 -11.1 8.1 43.4 40.6 12.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-256   PRO-257  12.3 12.5 7.9 5.4 103.2 111.9 0.3
 PRO-257   PHE-258  9.7 9.7 -5.7 0.3 53.0 45.8 19.3
 PHE-258   VAL-259  7.0 7.4 -18.7 15.7 129.5 124.4 10.7
 VAL-259   GLY-260  3.5 3.9 2.2 -0.9 119.5 123.7 7.2
 GLY-260   VAL-261  1.8 2.6 5.6 13.6 63.8 65.2 42.2
 VAL-261   LEU-262  3.0 3.2 -7.3 4.2 79.5 81.8 13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-310   LEU-311  8.9 9.1 3.2 -7.3 90.2 87.8 -1.8
 LEU-311   ALA-312  5.6 5.7 -2.8 13.8 78.8 81.5 -15.0
 ALA-312   LYS-313  4.7 4.9 -18.6 -2.2 18.3 33.5 53.6
 LYS-313   ASP-314  4.2 4.3 -15.0 19.4 83.7 80.1 35.1
 ASP-314   PRO-315  0.6 0.8 8.5 1.8 60.0 67.0 19.9
 PRO-315   ARG-316  3.8 3.0 -4.3 1.7 144.7 144.3 -9.1
 ARG-316   ILE-317  3.9 3.8 -2.1 4.3 141.4 142.5 6.4
 ILE-317   ALA-318  1.0 0.8 1.1 0.2 76.3 78.8 12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-325   LYS-326  8.9 9.1 -14.7 18.5 65.1 62.2 -16.7
 LYS-326   GLY-327  11.2 11.5 -8.3 -12.6 38.9 30.2 54.5
 GLY-327   GLU-328  9.3 9.4 1.7 -20.5 155.0 138.1 57.2
 GLU-328   ILE-329  8.4 8.0 23.6 -8.9 102.3 102.0 -32.1
 ILE-329   MET-330  5.1 4.6 -2.0 3.0 42.5 29.3 -7.6
 MET-330   PRO-331  4.0 3.8 23.5 -12.6 145.4 139.3 -11.4
 PRO-331   ASN-332  3.4 3.0 25.0 -18.0 104.6 97.5 31.8
 ASN-332   ILE-333  0.3 0.7 5.3 21.3 164.9 169.1 -68.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees