3-Deoxy-D-Manno-2-Octulosonic Acid Transferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-161   LYS-162  2.5 2.6 -1.3 -1.7 6.3 7.3 203.4
 LYS-162   PHE-163  3.2 3.2 4.2 -1.4 112.2 114.1 -108.1
 PHE-163   ILE-164  5.2 5.2 -1.8 1.4 99.6 99.7 13.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-340   CYS-341  7.8 7.7 -4.1 5.0 42.9 43.3 -29.9
 CYS-341   TYR-342  6.2 6.1 11.5 -15.4 99.7 100.0 143.1
 TYR-342   LEU-343  2.5 2.5 -1.1 11.4 62.4 62.7 -146.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees