Integrin Beta-3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-105   GLN-106  12.9 12.9 8.2 4.7 26.9 19.8 17.9
 GLN-106   VAL-107  10.5 10.8 -21.2 -31.7 87.4 98.0 1.0
 VAL-107   GLU-108  9.0 9.7 177.2 6.4 66.7 23.3 234.8
 GLU-108   ASP-109  5.4 9.4 12.3 -137.2 31.0 79.4 -203.4
 ASP-109   TYR-110  4.6 6.2 104.8 5.5 56.0 64.5 95.8
 TYR-110   PRO-111  7.4 7.1 0.3 -13.7 19.9 10.4 -29.3
 PRO-111   VAL-112  7.3 7.9 -17.1 -0.4 106.1 98.4 -8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-332   LEU-333  22.0 21.4 13.5 3.0 132.8 133.0 -11.3
 LEU-333   SER-334  20.9 20.1 -17.1 -80.5 73.8 75.6 56.6
 SER-334   MET-335  22.9 21.5 29.2 -1.2 161.0 107.1 -38.3
 MET-335   ASP-336  24.7 20.9 -14.3 27.3 43.9 140.7 -0.8
 ASP-336   SER-337  22.1 19.9 118.5 -156.3 74.3 80.0 -17.8
 SER-337   SER-338  19.1 16.3 -28.8 25.6 102.3 159.4 -5.4
 SER-338   ASN-339  18.8 16.1 -36.2 50.2 155.5 108.2 19.8
 ASN-339   VAL-340  17.7 17.2 -63.8 -10.4 95.8 74.3 11.9
 VAL-340   LEU-341  15.1 15.2 5.3 -12.8 64.0 76.9 -5.7
 LEU-341   GLN-342  12.2 11.9 18.2 12.5 7.5 17.6 46.5
 GLN-342   LEU-343  13.4 12.5 -2.4 -7.5 105.3 94.0 1.6
 LEU-343   ILE-344  14.7 13.0 10.5 -6.2 83.7 103.6 5.5
 ILE-344   VAL-345  11.5 9.5 8.7 -9.7 32.3 38.1 -4.3
 VAL-345   ASP-346  9.6 7.9 -5.3 15.1 143.3 133.6 10.8
 ASP-346   ALA-347  12.5 10.2 -9.2 7.3 90.9 77.1 -5.9
 ALA-347   TYR-348  13.2 10.2 -3.8 -2.3 109.4 103.4 -1.5
 TYR-348   GLY-349  10.0 6.6 9.6 -5.4 4.6 10.2 9.3
 GLY-349   LYS-350  9.7 6.8 26.4 -28.0 65.3 66.2 4.7
 LYS-350   ILE-351  13.4 10.0 40.7 -15.1 94.8 104.6 -16.3
 ILE-351   ARG-352  13.8 9.5 157.6 -31.4 47.9 43.9 130.2
 ARG-352   SER-353  11.3 11.2 153.8 -60.9 18.9 115.3 -315.9
 SER-353   LYS-354  12.6 12.9 -157.1 -21.6 112.8 135.5 215.7
 LYS-354   VAL-355  15.5 15.9 -4.4 26.8 80.0 86.4 2.3
 VAL-355   GLU-356  16.5 17.4 -5.9 -2.8 98.5 98.5 -3.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees