Glyceraldehyde-3-Phosphate Dehydrogenase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-174   THR-175  10.9 11.4 -1.5 -1.8 141.7 152.6 132.4
 THR-175   THR-176  11.8 11.9 -6.5 14.4 124.8 124.0 93.5
 THR-176   ILE-177  9.0 9.0 -4.3 5.4 153.9 156.4 18.9
 ILE-177   HIS-178  9.9 10.0 -1.9 -8.8 115.6 117.2 19.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-207   PRO-208  16.4 16.5 1.4 0.4 9.7 10.3 -47.6
 PRO-208   ASN-209  17.1 17.0 3.4 -13.3 74.2 77.4 -67.8
 ASN-209   SER-210  15.4 15.6 42.1 -19.8 20.2 29.7 437.9
 SER-210   THR-211  15.0 14.2 28.1 5.1 87.2 92.0 25.0
 THR-211   GLY-212  11.7 10.8 -5.2 33.5 172.1 133.9 482.1
 GLY-212   ALA-213  11.2 10.0 -37.8 4.3 113.6 141.8 -245.6
 ALA-213   ALA-214  7.5 7.1 16.5 16.3 32.5 38.2 507.5
 ALA-214   LYS-215  8.2 9.9 -7.6 -32.9 144.6 147.1 -635.4
 LYS-215   ALA-216  10.5 11.1 -4.6 32.6 110.9 104.4 197.2
 ALA-216   ILE-217  9.1 9.0 -17.9 -12.6 97.3 113.0 -244.6
 ILE-217   GLY-218  5.4 5.7 -12.3 -3.4 150.6 167.1 -197.7
 GLY-218   LYS-219  6.0 6.7 0.9 -8.2 90.9 77.8 -60.5
 LYS-219   VAL-220  7.9 8.1 -1.0 13.2 82.3 86.2 -9.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-230   GLY-231  13.0 12.9 -5.8 10.3 136.2 142.9 43.8
 GLY-231   ALA-232  13.2 13.0 6.1 6.5 37.3 40.7 122.1
 ALA-232   GLN-233  12.0 12.0 4.4 3.2 42.3 47.6 14.5
 GLN-233   ARG-234  13.2 13.2 -24.1 18.2 130.4 137.9 -40.2
 ARG-234   VAL-235  11.6 11.6 -4.4 0.5 143.9 139.9 -42.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-239   GLY-240  1.8 1.7 1.0 -9.0 68.5 69.6 94.8
 GLY-240   SER-241  3.0 3.1 -0.6 -6.2 124.4 120.6 -131.4
 SER-241   LEU-242  4.7 4.9 14.3 -23.1 48.9 46.7 -14.3
 LEU-242   THR-243  7.2 7.2 -10.2 9.4 145.7 141.5 120.6
 THR-243   GLU-244  7.4 7.5 4.6 -9.1 66.7 65.3 -25.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees