Chaperone Protein Dnak

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LYS-489   ASP-490  30.1 31.1 -6.5 18.2 81.6 83.8 -3.6  ASP-490   LYS-491  33.8 34.7 -12.0 31.4 156.9 154.1 13.6  LYS-491   ASN-492  35.5 35.2 -38.4 20.6 88.4 121.0 -6.7  ASN-492   SER-493  39.0 38.8 -5.8 7.0 91.8 117.5 -5.1  SER-493   GLY-494  38.4 38.5 -20.0 20.5 125.8 118.7 -1.0  GLY-494   LYS-495  35.1 34.8 -18.3 13.4 54.6 60.0 4.7  LYS-495   GLU-496  33.6 34.9 15.8 38.3 92.8 129.5 -6.0  GLU-496   GLN-497  29.7 31.7 13.5 14.3 147.0 160.8 -23.6  GLN-497   LYS-498  26.9 31.3 -34.4 67.8 106.5 60.1 5.9  LYS-498   ILE-499  23.2 29.3 -17.4 22.3 42.6 54.4 2.0  ILE-499   THR-500  19.6 26.4 -17.8 14.6 132.6 45.4 -0.8  THR-500   ILE-501  16.4 25.0 -1.6 28.4 50.7 74.7 -10.2  ILE-501   LYS-502  13.1 21.5 -24.2 -24.8 124.0 17.0 26.7  LYS-502   ALA-503  9.6 20.8 7.3 117.1 76.6 97.1 2.4  ALA-503   SER-504  7.0 17.8 62.4 -13.2 134.6 45.6 3.9  SER-504   SER-505  4.8 15.5 157.8 -20.2 149.3 105.3 -89.3  SER-505   GLY-506  7.7 11.9 0.5 20.4 92.3 45.7 7.1  GLY-506   LEU-507  8.9 11.3 -33.7 -10.4 76.6 78.6 -7.6  LEU-507   ASN-508  8.9 13.5 6.1 -1.3 55.9 63.8 1.2  ASN-508   GLU-509  6.9 17.2 -5.6 -9.8 103.3 121.2 -3.4  GLU-509   ASP-510  9.5 19.3 5.0 18.3 133.1 119.5 -5.9  ASP-510   GLU-511  11.3 21.1 -14.8 7.3 66.9 71.3 0.9  GLU-511   ILE-512  11.2 17.9 -2.0 -4.8 132.0 138.5 2.3  ILE-512   GLN-513  12.8 16.9 1.7 -0.4 93.0 73.3 -2.3  GLN-513   LYS-514  15.3 20.4 1.5 -6.7 138.7 129.3 5.3  VAL-516   ARG-517  19.1 18.9 -0.4 1.2 53.0 76.7 2.4  ARG-517   ASP-518  20.9 22.3 9.2 -7.8 124.4 128.5 -3.8  ASP-518   ALA-519  20.8 20.7 13.5 4.7 65.8 60.6 0.6  ALA-519   GLU-520  22.5 19.2 -3.7 7.2 109.2 118.7 0.1  GLU-520   ALA-521  24.9 22.6 -9.2 20.9 39.6 51.0 -0.4  ALA-521   ASN-522  26.0 24.4 -4.4 31.3 63.6 76.3 -7.6  ASN-522   ALA-523  26.3 22.2 -57.7 -5.2 124.4 136.3 197.1  ALA-523   GLU-524  28.3 23.2 4.3 -3.2 114.8 95.4 1.2  GLU-524   ALA-525  31.5 26.8 -3.0 13.8 47.9 42.5 0.3  ALA-525   ASP-526  29.8 26.6 -5.0 20.1 111.8 107.7 -1.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees