Acetylglutamate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-8   LEU-9  3.7 3.3 1.9 7.2 52.1 55.4 26.2
 LEU-9   GLY-10  4.7 4.3 -3.1 81.7 92.9 83.7 1.0
 GLY-10   GLY-11  8.3 7.8 -36.7 -145.7 112.0 155.7 -507.9
 GLY-11   VAL-12  11.1 10.4 142.0 16.6 16.8 53.9 622.1
 VAL-12   LEU-13  12.9 11.2 -19.5 -5.9 128.7 118.1 -42.1
 LEU-13   LEU-14  10.0 7.6 -30.6 5.5 118.2 141.1 -66.8
 LEU-14   ASP-15  8.6 7.5 -11.7 11.5 157.7 139.2 -13.1
 ASP-15   SER-16  10.9 10.5 -8.4 -6.4 124.1 119.9 -26.1
 SER-16   GLU-17  9.6 9.4 -4.1 2.6 114.0 119.5 -6.2
 GLU-17   GLU-18  7.0 7.1 9.1 -2.4 101.5 99.9 10.1
 GLU-18   ALA-19  8.4 8.6 -4.1 9.1 22.1 32.3 -13.1
 ALA-19   LEU-20  7.8 7.2 -2.3 -3.5 85.9 100.8 15.6
 LEU-20   GLU-21  4.1 3.7 -5.5 7.0 114.3 119.1 -9.9
 GLU-21   ARG-22  4.4 4.6 2.3 -3.8 128.4 128.7 4.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-32   SER-33  14.8 16.2 -17.5 5.5 53.4 48.1 32.0
 SER-33   HIS-34  16.0 17.8 -14.2 -4.6 15.2 28.5 68.8
 HIS-34   GLN-35  14.9 16.3 -3.2 -13.6 89.6 96.2 -26.2
 GLN-35   ARG-36  16.2 16.4 29.9 3.9 116.3 131.1 -101.5
 ARG-36   PRO-37  13.2 13.7 10.1 2.8 49.0 67.1 46.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-41   HIS-42  7.2 6.9 9.9 -22.6 66.6 67.2 -47.3
 HIS-42   GLY-43  7.8 7.9 1.3 3.8 100.4 95.4 5.6
 GLY-43   GLY-44  10.6 11.1 -7.9 117.6 156.0 158.2 406.9
 GLY-44   GLY-45  12.4 13.1 -63.7 115.9 85.5 118.3 -111.5
 GLY-45   CYS-46  15.6 12.9 -122.8 -10.3 138.2 112.7 -376.4
 CYS-46   VAL-47  15.9 15.8 37.0 -11.0 38.8 52.7 81.2
 VAL-47   VAL-48  15.6 15.9 2.9 8.2 99.1 108.6 16.5
 VAL-48   ASP-49  18.7 18.4 -2.6 -7.4 95.5 94.8 -6.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-178   LEU-179  3.9 3.4 -5.7 -4.7 126.2 129.6 6.4
 LEU-179   SER-180  5.4 4.5 1.4 -22.7 69.7 60.6 -45.7
 SER-180   ASP-181  9.0 7.7 26.0 0.8 54.5 70.4 57.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees