Simian Virus 40

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  SER-294   VAL-295  19.3 19.3 -9.3 26.0 116.5 114.1 3.8  VAL-295   LYS-296  17.0 17.0 30.9 -11.0 97.1 108.5 0.2  LYS-296   ASN-297  13.6 13.6 -54.1 51.1 154.0 139.5 -12.9  ASN-297   PRO-298  11.0 11.3 -15.6 -11.1 95.1 122.7 -15.3  PRO-298   TYR-299  11.5 10.7 -4.4 24.0 102.1 119.1 13.6  TYR-299   PRO-300  8.2 8.3 154.5 64.2 132.5 107.0 68.9  PRO-300   ILE-301  5.0 5.4 43.2 47.5 66.6 77.6 25.5  ILE-301   SER-302  2.0 1.9 -9.7 -28.7 129.5 128.4 -43.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees