Phosphoenolpyruvate Carboxykinase [Atp]

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-238   ILE-239  1.9 1.1 7.5 -9.2 61.0 62.3 -8.8
 ILE-239   PHE-240  1.2 1.4 9.2 -8.6 54.6 51.5 21.8
 PHE-240   PHE-241  3.0 3.9 -22.6 33.1 142.4 137.5 49.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-246   GLY-247  12.1 13.1 5.3 62.7 15.5 34.8 360.9
 GLY-247   LYS-248  12.6 12.1 -41.5 10.7 113.6 127.2 -117.4
 LYS-248   THR-249  9.2 9.6 -7.4 -1.7 162.8 158.8 -59.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-348   LYS-349  6.7 5.5 0.4 -7.2 80.8 81.2 -9.8
 LYS-349   ARG-350  7.8 6.9 17.6 -8.9 49.0 54.2 42.2
 ARG-350   VAL-351  6.0 5.1 -3.8 -1.4 123.2 123.9 -15.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-399   SER-400  7.9 8.1 -38.4 35.5 105.2 111.0 34.4
 SER-400   SER-401  7.7 8.4 4.5 -7.8 70.7 69.8 -19.1
 SER-401   CYS-402  5.2 5.8 2.5 2.1 23.8 16.9 33.7
 CYS-402   PHE-403  4.8 4.8 2.5 -6.2 51.5 52.4 -18.1
 PHE-403   GLY-404  6.4 6.7 4.0 2.8 81.1 72.3 14.9
 GLY-404   ALA-405  9.7 9.7 -2.7 -5.7 36.5 42.9 40.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-428   LYS-429  9.9 8.8 1.3 17.2 47.9 46.3 82.3
 LYS-429   ALA-430  9.4 8.8 11.4 -15.1 74.3 73.3 -7.9
 ALA-430   TYR-431  6.9 6.5 6.6 -7.0 83.3 78.8 26.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees