Pectocin M2
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-103
THR-104
13.2
13.0
5.5
-8.3
128.9
123.3
6.4
THR-104
GLY-105
10.6
10.4
2.8
-8.0
67.5
57.8
-1.1
GLY-105
LEU-106
7.8
8.0
6.3
-2.2
85.8
75.4
-1.7
LEU-106
GLU-107
9.3
8.4
1.8
14.9
152.2
145.4
-10.2
GLU-107
PHE-108
9.8
8.0
-12.2
4.8
67.1
87.7
3.8
PHE-108
PHE-109
6.1
4.4
4.2
37.9
62.3
43.5
31.4
PHE-109
ASN-110
5.2
3.9
-48.5
86.4
103.8
77.5
7.1
LEU-116
PRO-117
13.4
6.7
-8.2
36.5
66.6
139.1
-2.3
PRO-117
ARG-118
10.2
8.2
173.6
-3.1
49.7
29.3
181.1
ARG-118
SER-119
6.8
6.2
-6.1
-25.6
140.1
136.9
-19.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees