Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-88
LEU-89
1.8
1.8
8.7
-7.1
30.9
32.3
57.2
LEU-89
THR-90
2.8
2.6
2.6
-4.4
52.2
53.7
16.7
THR-90
ILE-91
1.4
1.4
1.4
-5.6
16.7
15.9
-34.7
ILE-91
THR-92
1.1
1.2
0.4
2.2
55.3
55.7
-23.7
THR-92
TYR-93
2.7
2.8
-7.3
1.6
162.1
161.8
-46.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-103
PRO-104
9.3
9.9
-13.2
-3.3
22.5
31.8
178.4
PRO-104
PHE-105
7.7
7.9
2.5
-11.2
141.9
149.4
20.5
PHE-105
MET-106
8.8
8.6
2.1
-9.6
126.0
129.4
30.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-190
SER-191
8.3
8.3
7.1
-3.5
42.0
38.5
57.2
SER-191
THR-192
9.9
9.7
1.9
7.7
43.9
46.5
73.9
THR-192
SER-193
7.1
6.6
-8.0
-2.3
133.5
136.6
-78.1
SER-193
ILE-194
6.1
6.1
4.0
-3.1
53.6
57.4
-20.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-214
GLY-215
7.4
7.5
-5.0
10.7
135.4
131.7
59.4
GLY-215
TYR-216
5.4
5.5
-2.1
-3.4
99.4
95.6
10.5
TYR-216
GLY-217
3.1
3.0
12.0
-11.0
111.2
110.5
15.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees