Cd2 (Human)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-106   SER-107  2.5 1.9 -3.5 -1.9 119.6 113.4 -14.1
 SER-107   LYS-108  4.2 3.4 10.4 -10.1 57.8 58.3 4.9
 LYS-108   PRO-109  5.2 4.7 3.9 -6.1 130.7 126.2 17.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-123   VAL-124  8.4 8.7 -7.1 -8.4 65.7 66.3 42.3
 VAL-124   MET-125  5.0 5.2 12.4 -5.6 37.7 39.5 26.4
 MET-125   ASN-126  5.7 5.1 -0.9 0.2 100.0 101.3 -16.3
 ASN-126   GLY-127  4.2 3.2 2.5 -0.4 107.9 102.2 -7.7
 GLY-127   THR-128  2.6 2.3 29.0 -59.3 37.4 33.3 -129.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-162   THR-163  9.4 10.0 9.8 -15.7 96.5 101.4 11.0
 THR-163   ALA-164  6.4 7.2 -21.5 33.1 154.0 151.2 40.9
 ALA-164   GLY-165  4.1 4.8 -6.1 13.4 74.3 69.6 19.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-169   LYS-170  5.7 5.9 0.0 -1.1 82.7 82.5 8.3
 LYS-170   GLU-171  3.1 3.7 18.5 -28.9 67.6 68.8 -24.1
 GLU-171   SER-172  0.8 1.5 -29.3 30.4 99.5 90.6 11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees