Succinyl-Coa Synthetase, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-4   GLU-5  6.0 6.3 0.6 -2.6 35.2 34.1 6.0
 GLU-5   TYR-6  5.4 5.6 0.3 2.1 85.0 81.1 16.2
 TYR-6   GLN-7  3.7 3.5 2.1 -2.6 125.5 123.3 9.6
 GLN-7   SER-8  1.3 1.1 2.3 5.8 71.6 68.7 48.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-19   GLN-20  2.9 2.5 2.5 -19.3 119.7 119.6 52.8
 GLN-20   ARG-21  1.4 1.1 4.3 1.6 58.0 55.1 11.9
 ARG-21   PHE-22  5.1 4.6 -5.6 5.2 114.9 114.9 -15.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-106   GLU-107  7.2 7.2 4.2 -3.5 4.3 6.8 5.6
 GLU-107   ALA-108  6.5 6.5 -21.7 18.8 103.1 113.3 -32.0
 ALA-108   LEU-109  6.2 6.6 29.8 -17.8 45.8 42.1 55.9
 LEU-109   ASP-110  3.3 4.1 12.6 -0.8 65.2 55.8 29.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees