Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
9.7
9.7
-1.0
25.0
140.9
132.7
72.5
THR-107
LEU-108
7.9
7.3
23.6
-6.5
110.2
111.6
-74.8
LEU-108
GLY-109
4.4
3.5
-31.5
40.7
138.2
139.4
23.9
GLY-109
ILE-110
1.9
1.8
-50.0
28.4
62.6
70.4
34.2
ILE-110
SER-111
3.7
3.4
-4.7
-7.7
59.8
67.7
25.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-208
GLY-209
11.8
12.0
23.8
-28.4
98.6
93.0
-25.6
GLY-209
LEU-210
10.5
9.7
4.5
6.0
104.4
113.9
-17.8
LEU-210
ILE-211
7.1
6.5
2.4
4.0
157.5
160.9
-12.5
ILE-211
ASP-212
6.2
6.5
-165.4
157.2
70.2
46.7
-52.1
ASP-212
SER-213
3.3
3.5
133.9
-102.9
70.9
60.8
68.2
SER-213
LYS-214
4.4
4.1
-19.0
11.8
78.7
76.7
31.9
LYS-214
GLY-215
4.6
4.7
34.6
-28.0
38.9
35.4
24.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees