Manganese-Binding Lipoprotein Mnta

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-180   LEU-181  9.9 10.1 3.6 4.0 46.1 44.5 20.8
 LEU-181   ALA-182  8.2 8.3 -1.8 1.2 104.4 105.6 20.8
 ALA-182   THR-183  10.7 10.8 2.6 1.4 131.7 130.9 -9.7
 THR-183   LEU-184  10.9 10.6 -0.1 -1.8 89.6 94.6 -6.0
 LEU-184   ASP-185  7.5 7.1 6.4 -1.8 34.9 31.9 17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-207   ALA-208  10.8 11.1 19.7 -6.3 71.6 82.2 71.2
 ALA-208   PHE-209  8.1 8.1 7.5 -3.4 68.5 72.9 15.2
 PHE-209   LYS-210  6.9 6.8 -4.9 9.1 52.3 50.2 -25.6
 LYS-210   TYR-211  6.2 6.1 0.7 -7.3 74.0 72.5 -4.0
 TYR-211   PHE-212  3.4 3.5 0.4 -2.1 30.0 32.3 -44.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-224   GLU-225  16.7 16.3 -8.0 4.4 87.5 91.2 -111.4
 GLU-225   ILE-226  13.4 12.8 165.9 -96.5 74.1 69.0 353.3
 ILE-226   ASN-227  12.3 12.3 12.6 -124.2 137.4 81.5 297.9
 ASN-227   THR-228  14.7 15.1 -43.8 1.0 48.8 45.3 412.9
 THR-228   GLU-229  16.7 16.3 -161.1 -6.6 94.7 55.1 -475.0
 GLU-229   SER-230  20.3 17.4 -150.5 56.5 121.7 116.1 -488.9
 SER-230   GLN-231  22.2 20.9 19.1 -8.2 44.7 42.7 120.5
 GLN-231   GLY-232  21.5 20.9 -6.8 3.0 109.3 103.4 -15.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-277   ILE-278  13.6 13.9 -6.0 0.0 84.1 85.9 51.2
 ILE-278   PHE-279  10.3 10.5 19.7 -26.0 117.0 123.3 21.0
 PHE-279   THR-280  8.6 8.7 -21.6 8.9 19.5 24.8 110.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-294   GLU-295  4.3 4.1 0.5 1.2 120.9 121.2 -53.7
 ARG-298   TYR-299  1.7 2.1 0.3 1.6 98.4 101.4 -0.3
 TYR-299   ASN-300  4.6 4.9 1.8 -0.5 41.9 42.9 0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees