Perfringolysin O
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-59
ILE-60
23.8
23.1
37.6
-49.6
150.0
157.5
88.3
ILE-60
GLU-61
21.9
22.0
-1.9
47.5
82.5
90.9
-149.8
GLU-61
SER-62
22.7
22.5
-86.3
45.3
37.7
70.7
195.4
SER-62
PHE-63
20.7
20.7
73.6
-23.4
81.1
88.8
-50.8
PHE-63
VAL-64
17.3
17.0
35.0
-19.6
108.5
109.8
-120.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-69
LYS-70
5.2
4.7
-10.0
-1.3
84.9
90.9
10.3
LYS-70
ALA-71
3.9
4.4
-39.2
24.3
76.8
91.9
-17.0
ALA-71
GLY-72
3.1
3.5
29.2
-15.1
81.4
90.3
-14.9
GLY-72
ASN-73
6.3
6.9
-22.0
4.7
90.3
85.0
4.5
ASN-73
LYS-74
9.1
9.8
34.1
-30.7
133.2
143.2
-7.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-391
GLY-392
13.8
13.5
1.6
-10.4
74.7
72.8
42.1
GLY-392
LYS-393
17.6
17.3
-18.9
7.7
37.5
40.8
124.0
LYS-393
ILE-394
20.6
20.5
-9.7
5.9
106.5
109.2
-33.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees