Succinyl-Coa Synthetase, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-4   GLU-5  6.5 6.4 0.0 6.3 145.7 145.8 -5.3
 GLU-5   TYR-6  5.9 5.6 -3.6 -0.6 81.3 85.3 28.4
 TYR-6   GLN-7  3.7 3.9 -3.8 3.9 123.5 126.8 1.2
 GLN-7   SER-8  1.3 1.5 -2.1 -5.4 68.9 71.2 49.1
 SER-8   LYS-9  3.5 2.8 10.7 -5.1 148.5 146.7 -19.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-19   GLN-20  2.4 2.7 -6.3 24.7 119.7 118.7 51.8
 GLN-20   ARG-21  1.1 1.4 1.4 -8.8 124.9 119.8 11.7
 ARG-21   PHE-22  4.5 5.1 5.8 -4.1 114.7 114.7 -20.8
 PHE-22   PHE-23  6.2 6.4 1.2 -4.7 138.6 140.6 11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-106   GLU-107  7.3 7.3 -2.0 2.7 6.6 3.9 -5.0
 GLU-107   ALA-108  6.6 6.6 20.8 -19.1 113.3 104.1 -26.4
 ALA-108   LEU-109  6.8 6.4 -25.5 12.0 42.3 45.0 53.8
 LEU-109   ASP-110  4.3 3.5 -11.0 1.0 55.6 65.6 26.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees