Flavocytochrome C3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-46   ALA-47  13.3 12.3 18.9 -7.8 80.0 77.7 22.9
 ALA-47   GLU-48  10.0 9.4 177.7 -41.6 140.6 136.3 -226.4
 GLU-48   THR-49  8.8 5.9 -118.5 -84.6 71.1 102.3 99.2
 HIS-52   GLU-53  2.7 0.8 -125.4 -91.5 98.7 128.8 315.3
 GLU-53   HIS-54  2.2 1.6 173.9 58.9 29.5 19.3 -255.8
 HIS-54   TYR-55  1.9 1.9 -73.5 71.7 119.6 134.2 -0.3
 TYR-55   ASN-56  1.9 2.7 155.1 -133.0 129.1 102.0 -52.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-360   GLN-361  5.6 6.1 -6.4 0.0 65.8 74.8 22.6
 GLN-361   ALA-362  4.9 4.7 8.1 -27.5 136.4 136.2 24.1
 ALA-362   HIS-363  2.3 1.7 42.9 -54.5 124.0 121.1 17.0
 HIS-363   PRO-364  4.4 2.8 0.2 14.7 90.5 89.4 -2.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-498   PRO-499  7.5 7.5 -8.3 6.8 74.6 71.3 23.2
 PRO-499   GLY-500  4.3 4.6 0.4 0.5 74.8 77.1 21.1
 GLY-500   VAL-501  1.3 2.6 -9.6 16.8 56.7 56.0 20.1
 VAL-501   HIS-502  2.5 3.7 4.7 -5.1 58.0 45.0 3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees