Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-496   SER-497  10.6 10.6 -4.5 4.2 32.6 31.4 22.8
 SER-497   LEU-498  8.3 8.4 4.7 -11.7 77.4 78.1 -23.4
 LEU-498   GLY-499  4.5 4.7 8.0 -17.4 150.6 152.0 98.0
 GLY-499   ILE-500  1.8 1.9 4.8 3.4 75.4 78.0 41.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-704   GLU-705  5.8 5.7 10.7 -12.9 94.1 92.9 42.9
 GLU-705   SER-706  3.0 2.7 4.9 -6.0 133.7 135.7 1.9
 SER-706   THR-707  0.6 1.0 5.4 -3.7 154.8 154.4 -2.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 TYR-711   ILE-712  1.0 0.8 3.2 -3.3 62.9 61.8 38.5
 ILE-712   GLU-713  4.5 4.5 2.5 -4.8 69.4 71.0 -13.6
 GLU-713   GLN-714  5.4 5.6 1.0 -6.3 22.1 22.4 -90.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 SER-729   LYS-730  5.0 5.3 -9.8 21.1 96.9 91.3 -77.5
 LYS-730   GLY-731  6.9 6.7 -2.5 -18.4 31.8 40.4 244.6
 GLY-731   TYR-732  9.5 9.4 -4.1 -6.8 71.3 71.7 -57.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 TRP-767   TYR-768  3.9 4.0 -2.9 10.5 127.8 124.9 -0.7
 TYR-768   ASP-769  5.5 5.6 -2.3 -10.4 166.2 167.1 -213.5
 ASP-769   LYS-770  7.0 6.8 6.8 20.5 45.7 61.8 226.2
 LYS-770   GLY-771  3.7 3.6 -7.9 -16.1 64.5 71.9 122.2
 GLY-771   GLU-772  2.6 2.5 20.3 -27.2 45.4 39.6 -20.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees