Crispr-Associated Endonuclease Cas9/csn1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-668   MET-669  5.5 5.1 0.6 -6.6 122.5 101.5 4.8
 MET-669   ALA-670  3.6 2.8 -87.0 63.9 25.6 37.7 17.3
 ALA-670   ARG-671  2.4 5.9 113.5 -46.3 135.2 131.2 -41.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-827   GLU-828  25.2 27.1 -133.4 2.2 25.5 18.8 93.8
 ALA-829   GLY-830  18.6 21.6 141.1 -177.7 118.5 76.4 14.2
 GLY-830   PHE-831  16.2 18.4 71.0 1.7 90.2 101.2 -54.7
 PHE-831   ILE-832  12.5 18.0 -151.2 47.2 115.6 12.8 -115.3
 ILE-832   LYS-833  11.5 18.3 -171.4 -3.7 71.0 72.2 20.0
 LYS-833   ARG-834  8.2 16.0 -11.7 -22.7 47.3 114.2 10.0
 ARG-834   GLN-835  10.1 13.5 13.7 -25.6 146.2 121.5 8.3
 GLN-835   LEU-836  8.5 14.1 20.1 -47.5 83.2 161.8 17.2
 LEU-836   VAL-837  5.1 13.6 -9.6 -12.1 78.0 79.7 15.4
 VAL-837   GLU-838  6.6 11.8 176.9 -23.4 177.7 76.5 -58.8
 GLU-838   THR-839  7.3 8.0 -167.5 -52.5 59.4 105.6 -22.9
 THR-839   ARG-840  3.9 7.2 25.7 -8.4 89.7 107.6 11.4
 ARG-840   GLN-841  3.2 4.9 -164.4 -27.2 53.3 43.0 93.1
 GLN-841   ILE-842  6.6 7.4 12.5 7.5 164.8 151.4 -14.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees