Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-710   LEU-711  20.3 20.3 -19.4 19.9 105.7 105.4 0.3
 LEU-711   ASP-712  17.0 17.1 -8.3 13.4 59.7 57.9 3.1
 ASP-712   THR-713  14.1 14.2 13.3 -10.4 67.2 56.4 -21.4
 THR-713   LYS-714  10.9 11.0 13.3 -12.2 121.1 113.0 -0.2
 LYS-714   GLY-715  8.7 8.1 -29.3 17.2 77.9 72.2 9.9
 GLY-715   PRO-716  5.8 5.3 17.4 -25.2 82.3 89.7 8.8
 PRO-716   GLU-717  2.0 1.8 -79.9 28.8 45.4 35.7 112.8
 GLU-717   ILE-718  2.9 2.7 9.6 13.6 82.4 78.5 -12.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-814   VAL-815  10.6 9.9 -0.2 -21.1 34.4 43.6 51.8
 VAL-815   ASP-816  8.0 6.9 -2.9 -6.2 26.4 45.6 -16.5
 ASP-816   LEU-817  8.5 7.1 17.8 2.6 123.1 120.0 32.0
 LEU-817   PRO-818  4.8 3.5 2.9 -22.0 113.4 116.7 30.8
 PRO-818   ALA-819  4.8 3.5 -13.4 -3.7 124.3 112.4 -27.9
 ALA-819   VAL-820  6.8 5.8 9.4 -13.9 97.0 114.8 -8.6
 VAL-820   SER-821  5.6 5.6 -44.1 22.5 65.5 56.1 48.2
 SER-821   GLU-822  3.2 3.4 -12.6 -7.3 27.7 31.6 29.8
 GLU-822   LYS-823  4.3 4.4 13.4 -9.9 78.3 75.8 -3.4
 LYS-823   ASP-824  7.5 7.2 -2.8 2.8 102.6 112.9 -8.3
 ASP-824   ILE-825  8.0 7.6 3.3 -0.7 141.3 135.3 -15.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees