Thermosome

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-30   LEU-31  8.3 8.2 3.4 3.9 92.3 98.2 -12.4
 LEU-31   GLU-32  5.0 4.9 13.9 32.6 21.5 25.3 157.6
 GLU-32   ILE-33  4.3 4.0 20.6 23.3 82.5 96.9 -6.6
 ILE-33   LYS-34  5.7 4.4 -0.5 -46.8 145.9 85.5 -53.9
 LYS-34   LYS-35  8.6 7.9 -7.1 -43.7 144.4 105.9 -135.5
 LYS-35   THR-36  8.4 11.0 -177.8 7.9 95.0 48.6 255.7
 THR-36   GLU-37  12.0 14.1 -162.1 -10.6 56.0 106.7 -572.8
 GLU-37   ILE-38  11.6 17.1 -1.0 -13.0 119.0 123.1 -9.9
 ILE-38   GLU-39  9.6 19.7 177.3 14.0 33.8 39.3 722.1
 GLU-39   ALA-40  11.2 18.7 -178.2 -65.5 79.8 85.9 -103.1
 ALA-40   LYS-41  14.6 17.1 -179.0 -58.0 68.5 153.9 -416.3
 LYS-41   VAL-42  14.2 17.0 157.3 -16.5 47.7 100.8 185.1
 VAL-42   GLN-43  13.5 16.2 176.1 -58.9 51.3 37.2 335.4
 GLN-43   ILE-44  16.1 18.8 159.1 -27.0 113.4 93.6 -283.2
 ILE-44   SER-45  18.9 18.6 127.7 -29.3 105.8 49.7 -207.9
 SER-45   ASP-46  18.3 22.0 -173.0 -41.6 134.0 97.8 374.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-66   LYS-67  5.4 6.5 -32.7 17.3 160.0 142.1 -53.5
 LYS-67   ILE-68  3.2 3.4 -42.7 21.3 101.7 105.0 -43.2
 ILE-68   LYS-69  5.5 5.4 -0.3 1.8 113.4 118.0 -11.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees