Xylanase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-68   TYR-69  5.7 5.6 -4.5 1.9 89.5 91.9 52.3
 TYR-69   GLY-70  4.5 4.3 -1.0 2.7 43.3 42.3 -19.4
 GLY-70   TRP-71  2.9 2.6 0.1 1.1 78.2 82.6 26.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-78   TYR-79  7.1 7.0 7.0 -13.4 134.8 134.2 21.1
 TYR-79   TYR-80  3.7 3.6 -2.0 -0.8 90.5 92.0 16.6
 TYR-80   VAL-81  3.5 3.3 -12.0 9.4 57.0 55.2 45.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-106   ILE-107  2.6 2.3 1.4 0.1 137.3 141.1 -10.1
 ILE-107   TYR-108  0.7 0.9 -0.6 5.8 105.8 102.9 50.3
 TYR-108   THR-109  4.1 4.2 -8.8 12.0 43.0 41.9 -24.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-128   TRP-129  4.9 4.8 -1.1 3.7 87.2 89.3 63.0
 TRP-129   SER-130  2.8 2.7 -3.2 8.9 58.5 58.6 -21.7
 SER-130   VAL-131  2.1 1.9 9.2 -4.4 93.2 92.3 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-157   MET-158  12.0 12.2 6.3 -7.7 133.0 134.9 17.2
 MET-158   ASN-159  9.3 9.6 1.6 1.9 151.2 149.3 -36.3
 ASN-159   LEU-160  10.9 11.1 5.2 -10.0 140.4 140.0 64.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-165   TYR-166  4.7 4.6 3.3 -0.3 94.4 103.5 13.0
 TYR-166   GLN-167  2.0 1.8 -2.2 -8.4 24.7 25.3 77.9
 GLN-167   VAL-168  1.7 1.6 -5.9 5.9 99.0 98.1 -14.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees