Ribosome Maturation Factor Rimm

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-84   GLU-85  3.1 3.1 12.7 -6.0 60.7 69.3 18.6
 GLU-85   GLU-86  3.5 4.3 12.6 -8.0 127.3 136.6 -18.8
 GLU-86   GLY-87  7.1 7.7 0.8 -9.4 133.9 138.6 32.0
 GLY-87   ARG-88  7.5 7.7 3.2 5.6 126.4 112.9 -11.2
 ARG-88   TYR-89  4.0 3.9 4.4 -1.4 109.7 110.4 -8.6
 TYR-89   TYR-90  4.2 3.4 9.2 -19.2 119.9 104.2 17.8
 TYR-90   TYR-91  4.5 4.0 -28.0 -3.8 15.2 11.5 104.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees