DNA Polymerase III Subunit Gamma

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  SER-238   ALA-239  12.9 13.0 38.9 -20.7 57.2 71.7 16.1  ALA-239   MET-240  10.5 10.1 3.9 -38.3 61.6 82.1 -44.4  MET-240   LEU-241  11.5 10.5 2.4 -33.0 126.5 149.4 82.2  LEU-241   GLY-242  12.0 12.9 121.7 155.9 117.6 126.2 141.2  GLY-242   THR-243  8.4 11.6 -133.2 32.3 10.5 4.1 286.5  THR-243   LEU-244  9.8 10.4 -97.3 -3.9 79.7 63.8 -756.0  LEU-244   ASP-245  9.4 12.9 173.0 -40.0 105.4 154.3 451.2  ASP-245   ASP-246  12.6 14.2 -16.8 -90.5 1.9 74.0 -614.5  ASP-246   ASP-247  13.6 11.9 140.5 8.0 115.3 172.6 556.4  ASP-247   GLN-248  13.2 13.0 37.9 -15.5 93.6 126.0 -33.9  GLN-248   ALA-249  9.7 9.5 -14.9 54.3 49.5 72.9 -28.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees