Myosin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-493   ASN-494  3.6 3.4 7.1 -12.9 137.3 144.4 45.3
 ASN-494   HIS-495  1.6 1.6 7.1 -3.8 115.5 115.5 -26.0
 HIS-495   THR-496  2.2 2.2 -5.7 -4.2 51.3 53.0 68.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-515   ASP-516  5.3 5.9 4.2 -6.8 166.6 171.1 46.2
 ASP-516   PHE-517  7.3 7.5 3.1 3.0 101.7 108.7 -63.3
 PHE-517   GLY-518  6.6 7.0 1.2 -2.5 138.8 143.0 -4.5
 GLY-518   LEU-519  9.1 9.4 -2.1 1.5 33.8 34.4 18.4
 LEU-519   ASP-520  7.1 7.0 4.6 -15.7 122.6 120.1 31.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-716   CYS-717  4.9 4.7 -6.8 12.9 70.8 68.1 -38.2
 CYS-717   ARG-718  7.7 7.8 -29.0 2.5 19.8 13.0 251.4
 ARG-718   GLN-719  8.4 8.6 39.3 -17.3 126.4 124.1 -141.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees