Tryptic Core Fragment Of The Lactose Repressor Of 3 Escherichia Coli 4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-71   ALA-72  16.0 15.7 -19.4 11.8 98.4 101.6 -18.7
 ALA-72   LEU-73  17.5 17.3 19.6 -11.6 65.2 79.0 0.8
 LEU-73   HIS-74  14.5 14.0 -3.6 22.7 157.1 158.8 193.9
 HIS-74   ALA-75  13.7 12.8 -30.7 1.0 101.5 103.5 -123.7
 ALA-75   PRO-76  10.0 9.1 6.3 -0.3 101.1 100.9 -44.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-78   ILE-79  11.7 11.1 -3.9 -3.6 91.0 90.7 67.3
 ILE-79   VAL-80  9.7 9.6 1.2 -1.7 95.1 89.9 9.9
 VAL-80   ALA-81  13.2 13.1 3.3 -0.4 159.0 158.1 -37.7
 ALA-81   ALA-82  14.3 14.1 -5.6 -3.3 54.4 53.3 51.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-125   TYR-126  8.9 8.5 32.8 -31.4 137.8 139.9 16.4
 TYR-126   PRO-127  8.1 7.7 -14.6 12.8 66.7 62.4 67.9
 PRO-127   LEU-128  4.8 4.4 -8.7 12.7 34.2 36.0 -51.0
 LEU-128   ASP-129  4.3 4.5 -5.5 2.8 79.4 74.5 16.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-160   PHE-161  3.8 3.7 8.0 -1.8 47.2 45.6 48.7
 PHE-161   SER-162  2.9 3.0 -18.3 17.0 62.6 66.1 8.6
 SER-162   HIS-163  6.3 6.7 -16.8 11.7 69.5 70.2 4.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-291   ASP-292  3.8 4.0 -17.6 9.8 53.8 60.9 101.5
 ASP-292   PHE-293  2.8 3.0 -10.5 17.3 117.5 121.7 64.0
 PHE-293   ARG-294  5.5 5.3 -25.9 25.0 54.7 60.8 -53.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-318   LEU-319  7.5 7.7 12.0 -4.4 22.1 21.9 73.6
 LEU-319   PRO-320  5.0 5.1 -10.7 -4.3 96.9 105.8 -56.9
 PRO-320   VAL-321  5.4 5.7 -1.5 6.6 78.6 87.3 -17.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees