Preprotein Translocase Seca Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-212   LEU-213  18.7 17.3 41.8 -14.4 102.7 90.7 10.2
 LEU-213   ILE-214  16.1 16.5 -29.4 60.5 100.2 148.9 19.9
 ILE-214   ASP-215  18.0 18.5 48.8 -16.0 20.5 39.5 27.3
 ASP-215   GLU-216  20.2 15.7 143.7 6.3 46.0 90.1 -97.0
 GLU-216   ALA-217  17.9 14.5 -96.4 67.3 79.5 128.2 -7.3
 ALA-217   ARG-218  14.9 12.6 125.2 10.0 74.3 98.1 -64.9
 ARG-218   THR-219  16.0 9.1 -163.3 23.8 129.0 124.8 149.1
 THR-219   PRO-220  13.1 9.0 -79.2 -1.1 78.3 125.8 -10.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-223   SER-224  6.4 7.5 -163.2 11.2 140.8 145.1 -107.8
 SER-224   GLY-225  5.1 5.8 -51.7 35.0 127.8 113.1 255.7
 GLY-225   GLN-226  4.6 3.3 -21.8 -13.6 136.6 158.3 -33.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-343   GLU-344  15.9 16.2 -37.6 -44.4 86.3 126.3 197.1
 GLU-344   ILE-345  12.6 13.0 21.2 -10.3 36.7 72.1 11.9
 ILE-345   GLN-346  10.3 10.6 50.0 -12.1 72.3 93.3 -210.1
 GLN-346   ASN-347  8.3 6.9 -156.6 35.0 108.4 154.4 144.6
 ASN-347   GLU-348  4.5 6.3 82.4 -88.7 64.3 57.7 -19.9
 GLU-348   SER-349  4.5 5.2 -71.7 -58.6 118.0 126.0 -63.1
 SER-349   MET-350  2.9 3.2 12.4 -24.4 25.8 12.7 -10.4
 MET-350   THR-351  1.1 2.3 32.5 -82.2 42.0 70.7 -20.2
 THR-351   LEU-352  1.9 2.6 179.9 -69.5 68.0 12.3 76.0
 LEU-352   ALA-353  2.7 2.5 -179.9 21.9 171.6 113.1 139.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-354   ILE-355  3.7 4.6 5.1 86.7 3.4 66.8 -194.4
 ILE-355   THR-356  4.9 7.1 -31.3 53.2 98.2 104.8 1.9
 THR-356   PHE-357  7.7 9.9 161.5 -35.4 45.8 11.8 94.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees