Hyaluronate Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-179   ASP-180  10.5 10.6 10.8 -3.5 71.5 71.7 21.2
 ASP-180   TRP-181  7.6 7.8 0.1 -2.4 66.0 63.5 -13.8
 TRP-181   ASN-182  8.0 7.8 -1.9 0.5 45.7 47.7 14.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-185   ALA-186  8.1 6.5 -33.3 32.1 148.8 142.8 10.5
 ALA-186   GLY-187  8.5 7.8 11.4 -4.4 56.2 48.4 52.3
 GLY-187   ASN-188  5.2 4.6 1.1 -0.2 8.7 14.7 5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-376   ILE-377  10.7 11.0 -3.5 3.0 74.5 73.5 9.7
 ILE-377   GLU-378  7.7 7.9 12.0 -10.1 64.5 57.7 3.3
 GLU-378   GLN-379  6.1 6.9 0.6 -10.7 33.3 41.5 -71.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-418   LEU-419  3.8 3.0 7.4 -9.9 98.2 96.6 19.6
 LEU-419   LEU-420  5.2 4.5 15.5 -12.6 93.8 97.9 -2.8
 LEU-420   PRO-421  3.9 3.6 3.8 1.0 40.6 41.7 26.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-428   PRO-429  14.3 13.7 -0.3 -3.8 89.3 87.1 6.2
 PRO-429   ILE-430  11.7 10.9 6.9 15.3 23.7 28.4 169.8
 ILE-430   ASP-431  9.4 8.6 9.6 -13.1 83.1 85.4 11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-484   ILE-485  4.8 4.4 -2.2 1.2 52.6 54.4 7.7
 ILE-485   ALA-486  5.5 5.4 -11.9 4.6 106.3 107.6 0.8
 ALA-486   ASP-487  8.9 9.0 14.1 -16.4 43.5 35.8 0.3
 ASP-487   MET-488  7.5 7.9 19.8 25.3 106.1 98.2 -115.6
 MET-488   SER-489  6.8 7.8 -22.0 -59.8 52.1 91.5 171.5
 SER-489   GLU-490  9.8 11.5 -6.5 32.6 125.5 104.4 104.2
 GLU-490   GLY-491  13.4 14.7 -146.0 -129.0 67.8 43.0 -337.6
 GLY-491   GLU-492  16.9 16.2 -60.2 23.2 77.6 81.7 46.6
 GLU-492   THR-493  17.8 18.0 -24.2 3.1 70.9 73.2 36.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees