Fab Fragment Of Murine Monoclonal Antibody An02 Complex 3 With Its Hapten (2,2,6,6-Tetramethyl-1-Piperidinyloxy- 4 Dinitrophenyl)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-103   LEU-104  3.8 3.5 2.4 12.8 143.8 150.3 -53.1
 LEU-104   GLU-105  2.0 2.1 2.0 -8.5 75.5 77.2 62.7
 GLU-105   LEU-106  2.1 2.2 -9.5 -41.5 35.4 18.6 207.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees