Phosphoenolypyruvate Carboxykinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-121   PRO-122  1.6 1.5 2.6 -2.5 128.6 131.9 18.7
 PRO-122   PRO-123  2.6 2.4 6.5 -6.5 148.7 144.4 -5.2
 PRO-123   PRO-124  3.4 3.5 1.1 5.3 85.5 79.4 40.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-128   GLY-129  12.6 13.2 4.2 2.0 142.2 149.8 -48.4
 GLY-129   PRO-130  14.2 14.1 -15.8 -1.1 61.0 70.2 156.2
 PRO-130   PRO-131  13.0 12.9 2.3 1.0 121.1 123.5 -42.7
 PRO-131   GLN-132  9.6 9.4 -4.1 -7.9 16.8 15.7 229.8
 GLN-132   LEU-133  9.9 9.7 -0.2 20.1 47.7 49.7 -195.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-272   MET-273  7.3 7.7 -2.1 4.0 110.7 114.8 24.3
 MET-273   ALA-274  10.3 10.7 -1.1 0.1 114.6 113.8 -12.3
 ALA-274   GLN-275  8.8 9.2 3.1 0.0 128.3 129.5 -8.4
 GLN-275   GLN-276  8.9 9.4 0.5 3.5 70.1 73.7 -40.6
 GLN-275   GLN-276  8.9 9.4 0.5 3.5 70.1 73.7 -40.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-275   GLN-276  8.9 9.4 0.5 3.5 70.1 73.7 -40.6
 GLN-275   GLN-276  8.9 9.4 0.5 3.5 70.1 73.7 -40.6
 GLN-276   GLN-277  12.2 12.7 -13.0 4.2 43.0 42.7 24.7
 GLN-277   GLY-278  13.7 14.1 4.8 -13.1 128.5 126.7 43.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-284   LEU-285  3.5 3.4 4.6 -3.7 26.1 26.7 -2.9
 LEU-285   ILE-286  4.3 4.0 3.2 -2.7 66.7 66.3 40.0
 ILE-286   LEU-287  2.4 2.3 -4.2 8.2 160.1 160.9 39.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-325   CYS-326  3.9 4.1 13.1 -7.6 20.1 17.4 63.6
 CYS-326   VAL-327  4.0 3.7 -7.0 15.5 103.1 100.5 1.2
 VAL-327   GLY-328  1.9 1.6 -1.3 8.7 136.2 135.4 49.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-331   ALA-332  4.0 3.7 2.9 -3.8 58.6 58.5 19.3
 ALA-332   TRP-333  1.9 1.9 0.2 -6.6 128.1 128.5 62.4
 TRP-333   MET-334  5.2 5.4 -0.1 0.2 114.4 115.1 -18.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-344   ILE-345  5.9 6.3 3.5 0.9 122.7 123.0 -31.9
 ILE-345   ASN-346  5.7 6.1 -2.8 9.9 112.0 112.4 69.7
 ASN-346   PRO-347  4.9 5.0 0.1 -6.4 78.9 74.9 -28.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-434   MET-435  6.1 6.3 5.0 3.7 124.1 130.3 -58.1
 MET-435   ASP-436  4.5 4.6 7.8 -7.0 71.7 65.1 34.7
 ASP-436   PRO-437  1.2 1.2 5.6 -5.2 70.6 68.6 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-475   GLY-476  15.1 14.9 1.4 -4.5 92.9 92.6 -55.2
 GLY-476   SER-477  11.3 11.1 7.7 -3.4 27.6 27.6 35.0
 SER-477   ALA-478  11.0 10.9 3.2 -1.0 75.3 76.4 35.9
 ALA-478   MET-479  14.3 14.1 6.2 -7.7 58.8 55.6 0.1
 ALA-478   MET-479  14.3 14.1 6.2 -7.7 58.8 55.6 0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-478   MET-479  14.3 14.1 6.2 -7.7 58.8 55.6 0.1
 ALA-478   MET-479  14.3 14.1 6.2 -7.7 58.8 55.6 0.1
 MET-479   ARG-480  13.7 13.3 17.0 4.5 120.9 117.0 -70.9
 ARG-480   SER-481  15.8 15.1 5.0 35.3 39.6 50.7 314.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-498   PHE-499  9.0 8.7 0.2 1.1 135.7 133.9 -0.7
 PHE-499   ALA-500  7.3 6.9 -2.4 4.3 64.9 68.3 15.8
 ALA-500   MET-501  8.0 7.5 -1.7 2.7 112.6 115.5 -4.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-510   ARG-511  5.9 5.9 7.2 -7.6 64.3 68.7 -24.8
 ARG-511   TYR-512  6.4 6.6 8.3 -5.8 3.3 3.7 29.3
 TYR-512   LEU-513  5.0 5.2 1.5 -4.2 70.7 69.7 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-514   HIS-515  10.3 10.3 -2.7 -0.9 41.4 40.9 33.2
 HIS-515   TRP-516  9.5 9.7 1.2 1.8 145.5 147.1 -30.8
 TRP-516   LEU-517  9.7 9.8 2.7 -8.0 87.7 87.5 32.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-521   ARG-522  18.4 18.7 -6.0 0.9 117.2 116.3 -11.4
 ARG-522   SER-523  18.4 18.8 2.9 -3.4 58.2 53.4 24.3
 SER-523   ASN-524  21.9 22.3 8.4 -1.2 7.5 12.6 78.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-613   TYR-614  17.5 17.2 1.9 -0.8 105.8 110.0 15.2
 TYR-614   TYR-615  14.6 14.5 2.0 -6.9 79.7 76.8 -5.1
 TYR-615   GLY-616  12.8 12.6 -1.9 11.1 165.1 166.8 52.3
 GLY-616   GLU-617  13.2 13.1 -3.6 -3.6 112.6 107.2 -51.0
 GLU-617   ASN-618  11.9 11.7 2.8 0.1 110.2 111.6 3.4
 ASN-618   PHE-619  9.2 9.0 5.1 -8.7 100.1 96.2 24.6
 PHE-619   GLY-620  7.9 7.7 0.6 -2.5 32.0 31.9 -8.1
 GLY-620   ALA-621  9.3 9.3 -4.1 2.5 81.9 82.1 15.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees