D-Methionine-Binding Lipoprotein Metq

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-113   ILE-114  6.8 8.1 14.5 -32.9 139.9 143.0 113.3
 ILE-114   ALA-115  8.2 8.6 -0.1 -29.6 37.5 46.9 90.0
 ALA-115   GLY-116  9.4 8.9 -2.5 19.1 34.6 31.7 -74.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-224   SER-225  2.2 1.1 -20.9 115.3 122.9 35.2 330.0
 SER-225   PRO-226  1.8 2.8 141.4 -4.1 132.6 97.6 -230.9
 PRO-226   TYR-227  5.2 6.3 4.3 17.7 102.0 80.6 -19.5
 TYR-227   VAL-228  6.2 7.0 -6.8 -3.7 40.3 28.2 -27.9
 VAL-228   ASN-229  6.1 7.3 7.4 20.8 101.0 99.0 -28.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees