Glutamine Phosphoribosylpyrophosphate Amidotransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-325   LYS-326  7.5 7.9 10.3 2.1 89.8 83.5 0.4
 LYS-326   ASN-327  5.3 5.4 -8.7 10.1 54.0 52.2 3.2
 ASN-327   ARG-328  1.8 1.9 -16.9 21.7 49.3 48.4 -3.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-343   LYS-344  8.5 7.5 179.7 17.8 67.8 113.3 -117.5
 LYS-344   SER-345  6.8 4.2 165.1 10.4 30.1 51.2 164.0
 SER-345   VAL-346  6.6 4.1 -8.0 -7.1 82.7 115.2 -2.3
 VAL-346   ARG-347  5.0 1.6 2.3 7.9 90.8 40.4 6.3
 ARG-347   ARG-348  1.5 1.6 -0.5 26.5 151.8 149.3 32.2
 ARG-348   LYS-349  2.3 2.4 -22.2 9.3 133.4 122.6 -9.9
 LYS-349   LEU-350  2.8 2.7 -15.5 -3.5 85.5 106.0 -4.7
 LEU-350   ASN-351  3.8 3.6 25.4 9.2 115.2 101.1 -18.8
 ASN-351   ALA-352  5.3 5.8 9.6 -27.7 87.8 102.7 8.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees