Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
6.6
6.5
-8.2
7.8
37.5
38.9
13.9
THR-107
LEU-108
4.0
4.0
5.9
-0.1
70.8
67.4
38.0
LEU-108
GLY-109
0.3
0.3
-18.6
3.5
41.2
44.5
63.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
8.0
8.1
-3.2
12.8
131.5
131.3
67.7
ASP-212
SER-213
4.5
4.8
4.7
-5.4
116.5
112.1
-3.9
SER-213
LYS-214
0.8
1.0
12.1
-1.4
84.8
84.9
41.8
LYS-214
GLY-215
3.0
2.9
-9.9
5.8
36.2
44.8
6.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees