Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-72   ALA-73  22.1 25.0 4.4 -8.1 129.2 167.0 2.3
 ALA-73   ARG-74  18.7 25.1 -18.7 -47.2 98.1 56.2 3.5
 ARG-74   LYS-75  18.8 21.9 -162.2 -90.0 75.1 127.6 30.1
 LYS-75   MET-76  22.5 19.5 99.9 51.1 150.7 118.4 -68.6
 MET-76   LYS-77  21.8 16.3 13.1 -81.7 114.6 54.4 -0.9
 SER-81   GLU-82  11.7 2.9 -125.3 63.7 115.3 110.4 -17.1
 GLU-82   GLU-83  8.0 0.8 97.9 -13.8 109.0 134.7 -26.4
 GLU-83   GLU-84  7.0 3.8 -17.7 -49.5 130.4 117.3 -23.3
 GLU-84   ILE-85  9.3 6.6 -175.0 142.1 140.9 158.9 188.3
 ILE-85   ARG-86  6.7 6.8 61.7 -21.5 95.8 91.7 -2.0
 ARG-86   GLU-87  4.0 5.4 25.4 -13.5 82.6 70.4 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-91   PHE-92  10.1 10.3 10.3 -28.0 154.2 153.7 9.9
 PHE-92   ASP-93  8.2 7.6 32.9 11.0 87.5 93.2 7.4
 ASP-93   LYS-94  7.9 7.6 -96.2 105.1 118.3 66.9 0.9
 LYS-94   ASP-95  11.6 11.2 -53.3 39.3 109.1 98.6 -2.8
 ASP-95   GLY-96  13.0 12.4 -61.8 47.8 133.3 160.5 -7.9
 GLY-96   ASN-97  10.5 11.1 35.3 -31.3 95.4 88.3 4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-103   GLU-104  11.1 9.9 -28.1 23.7 38.4 54.9 1.6
 GLU-104   LEU-105  10.2 9.4 -21.5 18.7 101.1 118.2 4.3
 LEU-105   ARG-106  8.4 8.2 -11.9 16.3 122.5 124.7 0.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-124   ILE-125  3.3 4.2 -0.5 -11.9 123.1 135.5 -3.2
 ILE-125   ARG-126  0.7 1.2 25.2 -18.0 104.6 110.4 1.0
 ARG-126   GLU-127  2.6 2.0 4.7 -16.3 64.6 85.2 0.2
 GLU-127   ALA-128  4.8 4.9 2.3 10.7 11.4 17.2 6.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-137   TYR-138  3.8 4.4 -58.9 32.4 60.6 57.1 -195.0
 TYR-138   GLU-139  1.9 2.2 10.5 17.8 80.6 100.8 3.9
 GLU-139   GLU-140  5.2 5.9 -6.9 -21.2 157.0 126.8 191.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees