Phosphate Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-123   ALA-124  10.9 10.9 -8.8 14.8 146.7 147.9 156.8
 ALA-124   LEU-125  11.6 11.8 -5.9 0.2 114.8 116.4 -62.2
 LEU-125   ALA-126  8.4 8.6 0.1 -4.9 13.1 15.3 -48.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-182   SER-183  9.4 9.3 1.5 -19.5 60.7 60.7 -356.8
 SER-183   VAL-184  12.0 11.4 17.7 20.3 31.7 17.5 620.8
 VAL-184   SER-185  10.2 10.0 -24.5 8.2 88.2 91.1 -94.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-189   TYR-190  11.4 11.6 -7.0 11.8 106.2 104.2 35.8
 TYR-190   PHE-191  11.4 11.5 -6.6 5.0 177.2 173.3 -41.7
 PHE-191   LYS-192  10.3 10.4 -0.4 -7.2 114.5 115.3 -72.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-206   GLU-207  9.7 9.6 -7.3 2.1 155.6 155.1 -117.4
 GLU-207   GLN-208  9.4 9.2 -9.3 14.2 117.9 118.5 -65.1
 GLN-208   PRO-209  8.2 8.0 3.5 -2.9 10.6 8.6 63.1
 PRO-209   GLY-210  8.5 8.4 -5.1 11.1 116.3 116.1 31.3
 GLY-210   SER-211  5.0 5.0 1.8 -6.5 135.8 134.7 71.4
 SER-211   ALA-212  2.7 2.7 2.1 -1.6 115.7 117.4 -93.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-220   SER-221  10.8 10.8 -3.5 4.5 141.0 140.6 57.9
 SER-221   LEU-222  8.2 8.3 1.9 0.8 58.3 56.0 199.3
 LEU-222   ASN-223  7.4 7.4 0.7 -4.7 79.8 78.9 -77.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-226   TYR-227  0.8 0.8 -2.6 7.5 120.2 120.8 -11.2
 TYR-227   SER-228  2.8 2.9 6.8 -8.1 23.7 25.6 20.2
 SER-228   GLY-229  2.7 2.7 -1.1 6.0 109.9 110.5 28.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-232   LYS-233  7.3 7.2 -0.6 -5.5 155.8 153.1 -61.9
 LYS-233   THR-234  9.2 9.3 0.2 -3.0 92.9 93.0 68.7
 THR-234   ALA-235  11.7 11.8 0.6 0.8 26.0 25.5 59.4
 ALA-235   SER-236  14.1 14.2 -8.3 1.6 143.8 138.3 -138.6
 SER-236   VAL-237  12.1 12.3 -1.3 -4.0 110.6 114.4 38.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-265   SER-266  12.9 13.3 6.5 -10.8 38.3 34.7 -111.1
 SER-266   ARG-267  14.1 14.2 0.8 6.0 38.9 43.5 139.0
 ARG-267   PHE-268  13.2 13.4 1.6 3.3 37.2 32.6 157.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees