Transposon Gamma-Delta Resolvase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-97   SER-98  7.1 7.0 -14.5 20.8 35.0 31.8 -2.7
 SER-98   THR-99  4.5 4.5 -18.3 20.4 104.1 109.6 -1.1
 THR-99   ASP-100  1.6 1.9 -34.8 -45.6 67.0 81.9 45.5
 ASP-100   SER-101  1.9 1.7 62.7 14.0 59.5 59.6 80.2
 SER-101   TYR-102  4.0 4.1 0.1 3.6 49.9 36.9 6.3
 TYR-102   ILE-103  4.7 5.0 -3.5 -4.6 143.4 130.2 -15.4
 ILE-103   GLY-104  3.0 2.9 -5.9 -0.4 76.3 73.6 0.0
 GLY-104   LYS-105  1.2 1.2 -0.7 2.9 94.2 96.7 1.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees