Lysozyme (E.C.3.2.1.17)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-7   ARG-8  4.4 4.7 -2.6 12.6 173.6 166.5 28.0
 ARG-8   ILE-9  4.5 4.7 3.0 -14.3 78.7 76.7 -21.3
 ILE-9   ASP-10  8.2 8.4 10.2 -11.3 101.4 110.9 8.7
 ASP-10   GLU-11  8.4 8.5 -14.9 18.6 123.2 111.2 25.1
 GLU-11   GLY-12  6.7 6.5 -13.3 15.6 175.3 172.5 -1.9
 GLY-12   LEU-13  5.8 5.4 -17.0 18.0 102.2 101.3 0.2
 LEU-13   ARG-14  2.5 2.1 15.5 -1.3 26.6 36.7 39.2
 ARG-14   LEU-15  3.5 3.1 -1.7 -1.5 101.7 102.1 -2.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-72   ALA-73  6.8 6.9 -11.2 7.0 118.2 107.7 3.7
 ALA-73   ALA-74  8.4 8.3 6.0 -9.9 59.6 63.2 -13.7
 ALA-74   VAL-75  5.7 5.5 27.1 -23.1 27.2 24.3 -10.3
 VAL-75   ARG-76  4.2 4.2 5.6 12.0 53.3 51.1 28.6
 ARG-76   GLY-77  7.8 7.7 -13.4 -6.7 110.6 103.5 -19.7
 GLY-77   ILE-78  8.3 8.5 22.4 -18.0 32.7 47.0 37.3
 ILE-78   LEU-79  5.7 5.9 10.4 -0.7 35.9 22.5 38.4
 LEU-79   ARG-80  6.0 5.7 16.2 -40.7 60.3 53.8 -87.8
 ARG-80   ASN-81  9.6 9.0 41.9 -9.6 68.0 91.5 52.7
 ASN-81   ALA-82  9.3 9.4 -1.1 18.8 147.1 153.0 72.9
 ALA-82   LYS-83  9.3 10.1 -22.6 1.7 94.4 97.4 -47.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees