Lysozyme

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-22   TYR-23  7.5 7.4 -22.8 11.1 153.4 158.7 -523.2
 TYR-23   SER-24  5.2 5.1 1.0 1.7 50.2 50.7 154.4
 SER-24   LEU-25  6.1 6.1 4.9 -4.6 63.2 65.4 -98.7
 LEU-25   GLY-26  4.4 4.4 -1.3 3.6 129.1 127.1 -18.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-96   LYS-97  4.4 4.4 2.4 -1.7 148.9 151.0 30.0
 LYS-97   ILE-98  5.5 5.5 1.2 -15.3 80.2 82.0 -23.5
 ILE-98   ALA-99  6.4 6.3 12.2 3.6 85.2 78.5 3.8
 ALA-99   SER-100  3.4 3.3 -2.4 5.6 35.6 35.1 -30.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-104   MET-105  6.1 6.0 5.2 -3.3 38.6 37.9 237.0
 MET-105   ASN-106  6.2 6.1 6.1 -5.8 76.9 75.1 39.1
 ASN-106   ALA-107  10.0 10.0 -0.8 -3.1 77.7 76.0 -164.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees