Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-97   LEU-98  9.5 10.1 4.8 -7.2 103.1 101.7 5.2
 LEU-98   ARG-99  6.4 6.8 -9.2 6.0 27.1 28.3 11.7
 ARG-99   LYS-100  6.5 7.0 -0.1 -3.5 92.1 92.5 -0.3
 LYS-100   LEU-101  7.6 8.8 -10.7 -4.2 109.5 110.2 -56.2
 LEU-101   VAL-102  4.8 6.3 -13.9 42.0 45.8 54.9 -110.0
 VAL-102   GLY-103  2.8 3.4 -22.8 -13.1 30.4 41.2 239.7
 GLY-103   ARG-104  5.3 5.9 18.6 -1.6 106.2 79.8 -41.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-105   PHE-106  6.0 7.0 -29.0 41.4 154.6 143.1 44.7
 PHE-106   THR-107  4.1 4.6 53.9 -25.7 42.1 39.2 192.2
 THR-107   VAL-108  6.9 6.9 4.2 -16.5 32.7 24.2 -85.7
 VAL-108   ARG-109  7.4 6.8 27.1 -6.2 95.8 80.1 22.8
 ARG-109   ARG-110  10.8 10.1 -2.5 3.6 58.0 75.8 19.6
 ARG-110   MET-111  9.7 9.3 -5.8 22.0 118.0 132.5 70.2
 MET-111   ASN-112  7.7 6.9 -2.8 -20.7 140.4 143.3 -111.4
 ASN-112   GLU-113  10.1 9.4 -0.6 -5.7 72.2 79.8 -33.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-148   VAL-149  15.7 15.7 10.8 -7.6 76.4 85.8 9.6
 VAL-149   ILE-150  12.4 12.4 5.0 8.6 34.2 32.3 80.1
 ILE-150   CYS-151  10.7 10.7 -0.3 1.5 147.5 141.6 -3.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-196   ARG-197  12.4 11.2 33.4 -21.5 84.1 85.2 -64.6
 ARG-197   LYS-198  15.2 14.3 -12.9 21.7 111.3 114.9 9.4
 LYS-198   ARG-199  13.1 12.7 -7.7 11.0 50.7 51.2 -70.9
 ARG-199   THR-200  11.5 11.5 -0.9 -17.4 120.8 114.8 -59.5
 ARG-199   THR-200  11.5 11.5 -0.9 -17.4 120.8 114.8 -59.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-199   THR-200  11.5 11.5 -0.9 -17.4 120.8 114.8 -59.5
 ARG-199   THR-200  11.5 11.5 -0.9 -17.4 120.8 114.8 -59.5
 THR-200   GLU-201  15.0 15.0 -3.2 14.9 48.6 45.4 58.7
 GLU-201   PRO-202  16.6 16.8 17.8 -20.0 145.8 142.7 -19.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-209   LEU-210  7.8 8.8 0.3 5.7 113.0 114.8 -18.5
 LEU-210   LEU-211  4.1 5.2 0.2 -4.0 161.7 173.6 20.0
 LEU-211   ALA-212  5.5 6.1 9.8 -27.2 125.7 107.0 75.9
 ALA-212   VAL-213  7.0 8.8 35.3 -17.7 102.9 78.2 94.1
 VAL-213   SER-214  4.7 7.7 164.5 -49.0 131.9 131.7 -563.8
 SER-214   ASP-215  1.6 9.4 -120.9 -87.8 16.4 131.2 -151.9
 ASP-215   MET-216  3.9 12.0 -135.0 4.0 60.8 61.1 438.9
 MET-216   ASP-217  5.3 15.6 56.8 13.3 99.3 135.4 -233.8
 ASP-217   GLY-218  4.2 14.5 -103.5 151.2 113.1 48.3 -117.9
 GLY-218   ASP-219  2.9 11.7 27.9 8.9 68.1 87.9 118.6
 ASP-219   ARG-220  6.5 9.0 153.2 -44.4 22.3 63.1 747.5
 ARG-220   LEU-221  6.2 5.5 -166.0 73.6 120.6 93.6 -214.7
 LEU-221   SER-222  3.1 2.2 24.9 3.2 133.9 141.1 -129.6
 SER-222   GLN-223  4.3 1.8 -7.5 10.9 103.9 109.0 -4.8
 GLN-223   GLU-224  5.5 3.9 -5.3 13.3 134.9 125.7 28.3
 GLU-224   GLU-225  8.5 6.6 -7.1 -2.1 156.4 158.1 -59.6
 GLU-225   LEU-226  6.6 4.9 -12.1 16.3 117.7 127.0 2.4
 LEU-226   VAL-227  4.9 3.4 -2.3 -9.8 115.4 117.6 -74.5
 VAL-227   ALA-228  8.6 7.2 7.1 9.3 36.4 51.2 86.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-230   MET-231  7.6 6.8 -7.0 -2.4 58.8 62.1 27.9
 MET-231   LEU-232  10.6 9.8 13.2 -12.6 153.7 144.2 0.6
 LEU-232   LEU-233  9.1 8.5 6.6 4.7 131.8 145.2 -80.2
 LEU-233   LEU-234  7.0 6.5 9.4 -15.9 108.7 116.8 41.8
 LEU-234   ILE-235  10.6 10.1 3.7 -6.4 135.2 121.7 19.4
 ILE-235   ALA-236  12.1 11.9 -2.6 -16.3 27.6 32.7 117.1
 ALA-236   GLY-237  9.4 9.6 9.6 -23.8 119.8 133.7 67.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-239   THR-240  13.9 14.2 -47.9 55.9 137.8 143.0 20.4
 THR-240   THR-241  11.1 11.6 22.8 -12.0 38.5 48.6 70.5
 THR-241   VAL-242  9.7 10.1 -2.0 -2.4 118.2 118.2 8.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees