Proline Dipeptidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-25   PRO-26  11.1 11.1 -0.4 -0.6 112.3 112.6 -125.9
 PRO-26   ILE-27  8.5 8.4 2.8 0.2 74.5 75.5 163.7
 ILE-27   GLY-28  6.0 6.0 2.1 -4.0 25.3 25.9 -108.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-163   ARG-164  10.6 10.6 0.4 -1.3 47.8 47.5 -85.4
 ARG-164   MET-165  8.0 7.9 1.5 2.0 5.6 7.2 165.1
 MET-165   CYS-166  9.3 9.3 -1.9 0.3 113.4 112.0 -67.7
 CYS-166   LYS-167  8.8 8.8 -4.2 1.5 62.2 62.3 41.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-170   GLU-171  7.2 7.2 -3.6 5.0 105.6 104.8 -30.7
 GLU-171   LEU-172  3.5 3.5 0.3 -1.5 14.2 14.3 15.2
 LEU-172   ALA-173  4.3 4.2 0.1 1.5 81.5 80.5 33.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees